#150470 Report by node trial-320208577- covering 1391 tests from 60 modules resulted into 203 errors

Report

ObsPy version
1.3.0.post0+148.g166e92c489.d…
GitHub Pull Request
-
Report file
JSON document
Total runtime
63.0 sec
Report date/time
Jan. 10, 2026, 1:45 a.m.

System / Python

Architecture
64bit
Machine
x86_64
Node
trial-320208577-trialrun-320208577-agent-238
Processor
Python Compiler
GCC 12.2.0
Python Implementation
CPython
Python Version
3.9.18
Release
5.10.135+
System
Linux
Version
#1 SMP Fri Nov 21 17:15:41 CST 2025

Dependencies

cartopy
---
decorator
5.2.1
flake8
---
geographiclib
---
lxml
6.0.2
matplotlib
3.9.4
numpy
2.0.2
obspy
1.3.0.post0+148.g166e92c489.dirty.obspy.master
pyproj
3.6.1
pytest
8.4.2
pytest-json-report
1.5.0
requests
2.32.5
scipy
1.13.1
setuptools
58.1.0
shapefile
---
sqlalchemy
2.0.44

Modules (60)

Module Errors / Failures Tracebacks
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem 5 1 2 3 4 5
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core 74 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80
obspy.core.event - -
obspy.core.inventory 1 6
obspy.core.util 2 81 82
obspy.db Not tested -
obspy.geodetics - -
obspy.imaging 7 83 84 85 86 87 88 89
obspy.io.ah 1 90
obspy.io.arclink - -
obspy.io.ascii 9 91 92 93 94 95 96 97 98 99
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css 2 100 101
obspy.io.dmx 4 102 103 104 105
obspy.io.focmec - -
obspy.io.gcf 6 106 107 108 109 110 111
obspy.io.gse2 1 112
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics 3 113 114 115
obspy.io.kml - -
obspy.io.mseed 1 116
obspy.io.ndk - -
obspy.io.nied 5 117 118 119 120 121
obspy.io.nlloc - -
obspy.io.nordic 1 122
obspy.io.pdas 1 123
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek 1 124
obspy.io.rg16 3 125 126 127
obspy.io.sac 37 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164
obspy.io.scardec 3 165 166 167
obspy.io.seg2 2 168 169
obspy.io.segy 1 170
obspy.io.seisan 3 171 172 173
obspy.io.seiscomp - -
obspy.io.sh 7 174 175 176 177 178 179 180
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav 6 181 182 183 184 185 186
obspy.io.win 1 187
obspy.io.xseed - -
obspy.io.y 1 188
obspy.io.zmap - -
obspy.realtime 13 189 190 191 192 193 194 195 196 197 198 199 200 201
obspy.scripts 2 202 203
obspy.signal Not tested -
obspy.taup Not tested -
Summary 203 203

Tracebacks (203)

Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 265, in test_get_all_stations_and_nslc
with TemporarySDSDirectory(year=None, doy=None, time=t) as temp_sds:
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 71, in __enter__
tr_.write(full_path, format="MSEED")
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 232, in test_get_waveforms_bulk
with TemporarySDSDirectory(year=year, doy=doy) as temp_sds:
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 71, in __enter__
tr_.write(full_path, format="MSEED")
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 106, in test_read_from_sds
with TemporarySDSDirectory(year=year, doy=doy) as temp_sds:
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 71, in __enter__
tr_.write(full_path, format="MSEED")
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 143, in test_read_from_sds_with_wildcarded_seed_ids
with TemporarySDSDirectory(year=year, doy=doy) as temp_sds:
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 71, in __enter__
tr_.write(full_path, format="MSEED")
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 171, in test_sds_report
with TemporarySDSDirectory(year=None, doy=None, time=t) as temp_sds, \
File "/workspace/testbed/obspy/clients/filesystem/tests/test_sds.py", line 71, in __enter__
tr_.write(full_path, format="MSEED")
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
175
176 For more examples see the :ref:`Obspy Gallery <gallery>`.
177
178 Dealing with the Response information
179 -------------------------------------
180 The :meth:`~obspy.core.inventory.response.Response.get_evalresp_response`
181 method will call some functions within evalresp to generate the response.
182
183 >>> response = cha.response
184 >>> response, freqs = response.get_evalresp_response(0.1, 16384, output="VEL")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.inventory[25]>", line 1, in <module>
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/inventory/__init__.py:184: UnexpectedException
3289 >>> s = ['', '', '3 Trace(s) in Stream:',
3290 ... 'IU.GRFO..HH2 | 2016-01-07T00:00:00.008300Z - '
3291 ... '2016-01-07T00:00:30.098300Z | 10.0 Hz, 301 samples',
3292 ... 'XX.GRFO..HH1 | 2016-01-07T00:00:02.668393Z - '
3293 ... '2016-01-07T00:00:09.518393Z | 100.0 Hz, 686 samples',
3294 ... 'IU.ABCD..EH2 | 2016-01-07T00:00:09.528393Z - '
3295 ... '2016-01-07T00:00:50.378393Z | 100.0 Hz, 4086 samples',
3296 ... '', '']
3297 >>> s = os.linesep.join(s)
3298 >>> st = Stream._dummy_stream_from_string(s)
UNEXPECTED EXCEPTION: AttributeError('`np.float_` was removed in the NumPy 2.0 release. Use `np.float64` instead.')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream._dummy_stream_from_string[3]>", line 1, in <module>
File "/workspace/testbed/obspy/core/stream.py", line 3318, in _dummy_stream_from_string
tr.data = np.ones(npts, dtype=np.float_)
File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
raise AttributeError(
AttributeError: `np.float_` was removed in the NumPy 2.0 release. Use `np.float64` instead.
/workspace/testbed/obspy/core/stream.py:3298: UnexpectedException
3474
3475 Rotate three explicitly specified channels to ZNE.
3476
3477 >>> from obspy import read, read_inventory
3478 >>> st = read("/path/to/ffbx_unrotated_gaps.mseed")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream._rotate_specific_channels_to_zne[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:3478: UnexpectedException
3416
3417 Rotate all matching traces to ZNE, specifying sets of component codes.
3418
3419 >>> from obspy import read, read_inventory
3420 >>> st = read("/path/to/ffbx_unrotated_gaps.mseed")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream._rotate_to_zne[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:3420: UnexpectedException
2400 the effect of the downsampling routine becomes clearer.
2401
2402 >>> from obspy import Trace, Stream
2403 >>> tr = Trace(data=np.arange(10))
2404 >>> st = Stream(traces=[tr])
2405 >>> tr.stats.sampling_rate
2406 1.0
2407 >>> tr.data
2408 array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9])
2409 >>> st.decimate(4, strict_length=False, no_filter=True)
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.decimate[5]>", line 1, in <module>
File "/workspace/testbed/obspy/core/stream.py", line 2418, in decimate
tr.decimate(factor, no_filter=no_filter,
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1853, in decimate
from obspy.signal.filter import integer_decimation
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:2409: UnexpectedException
2197
2198 ``'remez_fir'`` (experimental)
2199 Minimax optimal bandpass using Remez algorithm (uses
2200 :func:`obspy.signal.filter.remez_fir`).
2201
2202 .. rubric:: Example
2203
2204 >>> from obspy import read
2205 >>> st = read()
2206 >>> st.filter("highpass", freq=1.0) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.filter[2]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 2218, in filter
tr.filter(type, **options)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:2206: UnexpectedException
2557 a copy of your stream object.
2558
2559 >>> from obspy import read
2560 >>> st = read()
2561 >>> print(st) # doctest: +ELLIPSIS
2562 3 Trace(s) in Stream:
2563 BW.RJOB..EHZ | 2009-08-24T00:20:03... - ... | 100.0 Hz, 3000 samples
2564 BW.RJOB..EHN | 2009-08-24T00:20:03... - ... | 100.0 Hz, 3000 samples
2565 BW.RJOB..EHE | 2009-08-24T00:20:03... - ... | 100.0 Hz, 3000 samples
2566 >>> st.interpolate(sampling_rate=111.1) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.interpolate[3]>", line 1, in <module>
File "/workspace/testbed/obspy/core/stream.py", line 2575, in interpolate
tr.interpolate(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2476, in interpolate
func = _get_function_from_entry_point('interpolate', method)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:2566: UnexpectedException
3141 Deconvolve instrument response for all Traces in Stream.
3142
3143 For details see the corresponding
3144 :meth:`~obspy.core.trace.Trace.remove_response` method of
3145 :class:`~obspy.core.trace.Trace`.
3146
3147 >>> from obspy import read, read_inventory
3148 >>> st = read()
3149 >>> inv = read_inventory()
3150 >>> st.remove_response(inventory=inv) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.remove_response[3]>", line 1, in <module>
File "/workspace/testbed/obspy/core/stream.py", line 3170, in remove_response
tr.remove_response(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2810, in remove_response
from obspy.signal.invsim import (cosine_taper, cosine_sac_taper,
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:3150: UnexpectedException
2332
2333 .. rubric:: Example
2334
2335 >>> st = read()
2336 >>> print(st) # doctest: +ELLIPSIS
2337 3 Trace(s) in Stream:
2338 BW.RJOB..EHZ | 2009-08-24T00:20:03.000000Z ... | 100.0 Hz, 3000 samples
2339 BW.RJOB..EHN | 2009-08-24T00:20:03.000000Z ... | 100.0 Hz, 3000 samples
2340 BW.RJOB..EHE | 2009-08-24T00:20:03.000000Z ... | 100.0 Hz, 3000 samples
2341 >>> st.resample(10.0) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: AttributeError('`newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.resample[2]>", line 1, in <module>
File "/workspace/testbed/obspy/core/stream.py", line 2350, in resample
tr.resample(sampling_rate, window=window,
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1725, in resample
x = rfft(self.data.newbyteorder("="))
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
/workspace/testbed/obspy/core/stream.py:2341: UnexpectedException
2713 :type inventory: :class:`~obspy.core.inventory.inventory.Inventory` or
2714 :class:`~obspy.io.xseed.parser.Parser`
2715 :param inventory: Inventory or SEED Parser with metadata of channels.
2716
2717 Example to rotate unaligned borehole instrument data based on station
2718 inventory (a dataless SEED :class:`~obspy.io.xseed.parser.Parser` can
2719 also be provided, see details for option ``inventory``):
2720
2721 >>> from obspy import read, read_inventory
2722 >>> st = read("/path/to/ffbx_unrotated_gaps.mseed")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.rotate[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:2722: UnexpectedException
2110 raw data is not accessible anymore afterwards. To keep your
2111 original data, use :meth:`~obspy.core.stream.Stream.copy` to create
2112 a copy of your stream object.
2113 This also makes an entry with information on the applied processing
2114 in ``stats.processing`` of every trace.
2115
2116 .. rubric:: Example
2117
2118 >>> from obspy import read
2119 >>> from obspy.signal.invsim import corn_freq_2_paz
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.simulate[1]>", line 1, in <module>
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:2119: UnexpectedException
3229 :param npts_tol: Tolerate traces with different number of points
3230 with a difference up to this value. Surplus samples are discarded.
3231 :type time_tol: float
3232 :param time_tol: Tolerate difference, in seconds, in startime when
3233 setting the new starttime of the stack. If starttimes differs more
3234 than this value it will be set to timestamp 0.
3235
3236 >>> from obspy import read
3237 >>> st = read()
3238 >>> stack = st.stack()
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.stack[2]>", line 1, in <module>
File "/workspace/testbed/obspy/core/stream.py", line 3250, in stack
from obspy.signal.util import stack as stack_func
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:3238: UnexpectedException
2264 :func:`obspy.signal.trigger.carl_sta_trig`).
2265
2266 ``'zdetect'``
2267 Z-detector (uses :func:`obspy.signal.trigger.z_detect`).
2268
2269 .. rubric:: Example
2270
2271 >>> from obspy import read
2272 >>> st = read()
2273 >>> st.filter("highpass", freq=1.0) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.Stream.trigger[2]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 2218, in filter
tr.filter(type, **options)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/stream.py:2273: UnexpectedException
170 .RJOB..Z | 2005-08-31T02:33:49.850000Z - ... | 200.0 Hz, 12000 samples
171 .RNON..Z | 2004-06-09T20:05:59.850000Z - ... | 200.0 Hz, 12000 samples
172
173 (2) Reading a local file without format detection.
174
175 Using the ``format`` parameter disables the automatic detection and
176 enforces reading a file in a given format.
177
178 >>> from obspy import read
179 >>> st = read("/path/to/loc_RJOB20050831023349.z", format="GSE2")
UNEXPECTED EXCEPTION: TypeError('Format "GSE2" is not supported. Supported types: MSEED, SAC, GSE2, SEISAN, SACXY, GSE1, Q, SH_ASC, SLIST, TSPAIR, Y, PICKLE, SEGY, SU, SEG2, WAV, WIN, CSS, NNSA_KB_CORE, AH, PDAS, KINEMETRICS_EVT, GCF, DMX, KNET, REFTEK130, RG16')
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/util/base.py", line 414, in _read_from_plugin
read_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/gse2/core.py", line 8, in <module>
from . import libgse1, libgse2
File "/workspace/testbed/obspy/io/gse2/libgse1.py", line 21, in <module>
from .libgse2 import uncompress_cm6, verify_checksum, read_integer_data
File "/workspace/testbed/obspy/io/gse2/libgse2.py", line 36, in <module>
clibgse2 = _load_cdll("gse2")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "gse2"
/workspace/testbed/obspy/lib/gse2.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/gse2.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/gse2.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.stream.read[7]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 420, in _read_from_plugin
raise TypeError(msg % (format_ep.name, ', '.join(eps)))
TypeError: Format "GSE2" is not supported. Supported types: MSEED, SAC, GSE2, SEISAN, SACXY, GSE1, Q, SH_ASC, SLIST, TSPAIR, Y, PICKLE, SEGY, SU, SEG2, WAV, WIN, CSS, NNSA_KB_CORE, AH, PDAS, KINEMETRICS_EVT, GCF, DMX, KNET, REFTEK130, RG16
/workspace/testbed/obspy/core/stream.py:179: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_channel.py", line 32, in test_response_plot
cha.plot(0.005, outfile=image_path)
File "/workspace/testbed/obspy/core/inventory/channel.py", line 455, in plot
return self.response.plot(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1846, in plot
cpx_response, freq = self.get_evalresp_response(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_inventory.py", line 186, in test_response_plot
inv.plot_response(0.01, output="ACC", channel="*N",
File "/workspace/testbed/obspy/core/inventory/inventory.py", line 1140, in plot_response
cha.plot(min_freq=min_freq, output=output,
File "/workspace/testbed/obspy/core/inventory/channel.py", line 455, in plot
return self.response.plot(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1846, in plot
cpx_response, freq = self.get_evalresp_response(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_inventory.py", line 197, in test_response_plot_epoch_times_in_label
fig = inv.plot_response(0.01, label_epoch_dates=True, show=False)
File "/workspace/testbed/obspy/core/inventory/inventory.py", line 1140, in plot_response
cha.plot(min_freq=min_freq, output=output,
File "/workspace/testbed/obspy/core/inventory/channel.py", line 455, in plot
return self.response.plot(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1846, in plot
cpx_response, freq = self.get_evalresp_response(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_network.py", line 122, in test_response_plot
net.plot_response(0.002, output="DISP", channel="B*E",
File "/workspace/testbed/obspy/core/inventory/network.py", line 732, in plot_response
cha.plot(min_freq=min_freq, output=output, axes=(ax1, ax2),
File "/workspace/testbed/obspy/core/inventory/channel.py", line 455, in plot
return self.response.plot(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1846, in plot
cpx_response, freq = self.get_evalresp_response(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_network.py", line 133, in test_response_plot_epoch_times_in_label
fig = net.plot_response(0.01, label_epoch_dates=True, show=False)
File "/workspace/testbed/obspy/core/inventory/network.py", line 732, in plot_response
cha.plot(min_freq=min_freq, output=output, axes=(ax1, ax2),
File "/workspace/testbed/obspy/core/inventory/channel.py", line 455, in plot
return self.response.plot(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1846, in plot
cpx_response, freq = self.get_evalresp_response(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_preview.py", line 26, in test_create_preview
preview = create_preview(trace, delta=60)
File "/workspace/testbed/obspy/core/preview.py", line 69, in create_preview
diff = data.ptp(axis=1)
AttributeError: `ptp` was removed from the ndarray class in NumPy 2.0. Use np.ptp(arr, ...) instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_preview.py", line 200, in test_create_preview_with_unrounded_sample_rate
create_preview(tr, delta=30)
File "/workspace/testbed/obspy/core/preview.py", line 69, in create_preview
diff = data.ptp(axis=1)
AttributeError: `ptp` was removed from the ndarray class in NumPy 2.0. Use np.ptp(arr, ...) instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_preview.py", line 213, in test_create_preview_with_very_small_sample_rate
create_preview(tr)
File "/workspace/testbed/obspy/core/preview.py", line 69, in create_preview
diff = data.ptp(axis=1)
AttributeError: `ptp` was removed from the ndarray class in NumPy 2.0. Use np.ptp(arr, ...) instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_station.py", line 32, in test_station_response_plot
sta.plot(0.05, channel="*[NE]", outfile=image_path)
File "/workspace/testbed/obspy/core/inventory/station.py", line 551, in plot
cha.plot(min_freq=min_freq, output=output, axes=(ax1, ax2),
File "/workspace/testbed/obspy/core/inventory/channel.py", line 455, in plot
return self.response.plot(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1846, in plot
cpx_response, freq = self.get_evalresp_response(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_station.py", line 40, in test_response_plot_degrees
sta.plot(0.05, channel="*[NE]", plot_degrees=True,
File "/workspace/testbed/obspy/core/inventory/station.py", line 551, in plot
cha.plot(min_freq=min_freq, output=output, axes=(ax1, ax2),
File "/workspace/testbed/obspy/core/inventory/channel.py", line 455, in plot
return self.response.plot(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1846, in plot
cpx_response, freq = self.get_evalresp_response(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1702, in get_evalresp_response
response = self.get_evalresp_response_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1647, in get_evalresp_response_for_frequencies
output, chan = self._call_eval_resp_for_frequencies(
File "/workspace/testbed/obspy/core/inventory/response.py", line 1130, in _call_eval_resp_for_frequencies
import obspy.signal.evrespwrapper as ew
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stats.py", line 293, in test_casted_stats_nscl_writes_to_mseed
st.write(bio, 'mseed')
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 1457, in test_read_write_pickle
st2 = read(tf.name)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 1480, in test_read_pickle
st_no_format = read(bio)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 623, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 1697, in test_trim_consistent_start_end_time_nearest_sample
assert 3 == st[i].stats.npts
AssertionError: assert 3 == 4
+ where 4 = Stats({'sampling_rate': 1.0, 'delta': 1.0, 'starttime': UTCDateTime(1970, 1, 1, 0, 0, 4), 'endtime': UTCDateTime(1970,...(1970, 1, 1, 0, 0, 7)::fill_value=None::nearest_sample=True::pad=False::starttime=UTCDateTime(1970, 1, 1, 0, 0, 4))']}).npts
+ where Stats({'sampling_rate': 1.0, 'delta': 1.0, 'starttime': UTCDateTime(1970, 1, 1, 0, 0, 4), 'endtime': UTCDateTime(1970,...(1970, 1, 1, 0, 0, 7)::fill_value=None::nearest_sample=True::pad=False::starttime=UTCDateTime(1970, 1, 1, 0, 0, 4))']}) = <obspy.core.trace.Trace object at 0x7f02757ace50>.stats
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 1880, in test_integrate_and_differentiate
st1.filter('lowpass', freq=1.0)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 2218, in filter
tr.filter(type, **options)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 1917, in test_read
tr = read('/path/to/slist_float.ascii', dtype=np.int32)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 1958, in test_read_url_via_network
tr = read('https://examples.obspy.org/test.sac', dtype=np.int32)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 644, in _generic_reader
generic = callback_func(fh.name, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 1977, in test_read_path
st = read(data_path)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2017, in test_rotate
st.rotate(method='NE->RT', back_azimuth=30)
File "/workspace/testbed/obspy/core/stream.py", line 2746, in rotate
func = _get_function_from_entry_point("rotate", func)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2134, in test_detrend
st.detrend(type='simple')
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 2514, in detrend
tr.detrend(type=type, **options)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2027, in detrend
func = _get_function_from_entry_point('detrend', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2170, in test_taper
st.taper(max_percentage=0.05, type='cosine')
File "/workspace/testbed/obspy/core/stream.py", line 2532, in taper
tr.taper(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2147, in taper
func = _get_function_from_entry_point('taper', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2245, in test_method_chaining
temp = st.trim(st[0].stats.starttime + 1, st[0].stats.starttime + 10)\
File "/workspace/testbed/obspy/core/stream.py", line 2418, in decimate
tr.decimate(factor, no_filter=no_filter,
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1853, in decimate
from obspy.signal.filter import integer_decimation
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2300, in test_simulate_seedresp_parser
st.simulate(**kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 2151, in simulate
tr.simulate(paz_remove=paz_remove, paz_simulate=paz_simulate,
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1476, in simulate
from obspy.signal.invsim import simulate_seismometer
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2357, in test_remove_response
tr.remove_response(pre_filt=(0.1, 0.5, 30, 50))
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2810, in remove_response
from obspy.signal.invsim import (cosine_taper, cosine_sac_taper,
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2411, in test_integrate
tr.integrate()
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1965, in integrate
func = _get_function_from_entry_point('integrate', method)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2424, in test_integrate_args
tr.integrate(method='cumtrapz')
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1965, in integrate
func = _get_function_from_entry_point('integrate', method)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/util/base.py", line 414, in _read_from_plugin
read_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2678, in test_rotate_to_zne
st_unrotated = read("/path/to/ffbx_unrotated_gaps.mseed",
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 420, in _read_from_plugin
raise TypeError(msg % (format_ep.name, ', '.join(eps)))
TypeError: Format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SEISAN, SACXY, GSE1, Q, SH_ASC, SLIST, TSPAIR, Y, PICKLE, SEGY, SU, SEG2, WAV, WIN, CSS, NNSA_KB_CORE, AH, PDAS, KINEMETRICS_EVT, GCF, DMX, KNET, REFTEK130, RG16
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_stream.py", line 2730, in test_stack
st2 = st.copy().stack()
File "/workspace/testbed/obspy/core/stream.py", line 3250, in stack
from obspy.signal.util import stack as stack_func
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1223, in test_detrend
tr.detrend(type='simple')
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2027, in detrend
func = _get_function_from_entry_point('detrend', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1261, in test_integrate
tr.integrate()
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1965, in integrate
func = _get_function_from_entry_point('integrate', method)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1344, in test_taper
tr.taper(max_percentage=0.05, type='cosine')
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2147, in taper
func = _get_function_from_entry_point('taper', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2458, in resolve
return functools.reduce(getattr, self.attrs, module)
AttributeError: module 'scipy.signal' has no attribute 'hann'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1359, in test_taper_onesided
tr.taper(max_percentage=None, side="left")
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2147, in taper
func = _get_function_from_entry_point('taper', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2460, in resolve
raise ImportError(str(exc)) from exc
ImportError: module 'scipy.signal' has no attribute 'hann'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2458, in resolve
return functools.reduce(getattr, self.attrs, module)
AttributeError: module 'scipy.signal' has no attribute 'hann'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1389, in test_taper_length
tr.taper(max_percentage=0.7, max_length=int(npts / 2) + 1)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2147, in taper
func = _get_function_from_entry_point('taper', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2460, in resolve
raise ImportError(str(exc)) from exc
ImportError: module 'scipy.signal' has no attribute 'hann'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1430, in test_times
assert np.alltrue(tr.data.mask == tm.mask)
File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
raise AttributeError(
AttributeError: `np.alltrue` was removed in the NumPy 2.0 release. Use `np.all` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1588, in test_simulate_evalresp
assert patch.call_count == 1
UnboundLocalError: local variable 'patch' referenced before assignment
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1640, in test_resample
tr_2 = tr.copy().resample(sampling_rate=50.0)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1725, in resample
x = rfft(self.data.newbyteorder("="))
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1667, in test_method_chaining
temp_tr = tr.trim(tr.stats.starttime + 1)\
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1738, in test_remove_response
tr1.simulate(seedresp={"filename": parser, "units": "VEL"},
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1476, in simulate
from obspy.signal.invsim import simulate_seismometer
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1763, in test_remove_polynomial_response
tr.remove_response()
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2810, in remove_response
from obspy.signal.invsim import (cosine_taper, cosine_sac_taper,
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1813, in test_processing_info_remove_response_and_sensitivity
tr.remove_response()
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2810, in remove_response
from obspy.signal.invsim import (cosine_taper, cosine_sac_taper,
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1836, in test_processing_information
tr.filter("lowpass", freq=2.0)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1888, in test_no_processing_info_for_failed_operations
tr.detrend()
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2027, in detrend
func = _get_function_from_entry_point('detrend', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1915, in test_interpolate
org_tr = read("/path/to/%s" % file_)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 1992, in test_interpolation_time_shift
tr.interpolate(method="lanczos", sampling_rate=10.0, a=20)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2476, in interpolate
func = _get_function_from_entry_point('interpolate', method)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 2062, in test_interpolation_arguments
interp_tr = tr.copy().interpolate(sampling_rate=0.3,
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2473, in interpolate
func = _get_function_from_entry_point('interpolate',
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 2119, in test_resample_new
tr.resample(0.5, window='hann', no_filter=True)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1725, in resample
x = rfft(self.data.newbyteorder("="))
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 2298, in test_remove_response_plot
tr = read("/path/to/IU_ULN_00_LH1_2015-07-18T02.mseed")[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 2309, in test_remove_response_default_units
tr = read("/path/to/1T_MONN_00_EDH.mseed")[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 2442, in test_dtype_is_not_unnecessarily_changed
lowpass = tr_int32.copy().filter("lowpass", freq=2.0)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_trace.py", line 2717, in test_resample_short_traces
tr.resample(30)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1725, in resample
x = rfft(self.data.newbyteorder("="))
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_utcdatetime.py", line 47, in test_from_numpy_string
dt = UTC(np.string_("1970-01-01 12:23:34"))
File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
raise AttributeError(
AttributeError: `np.string_` was removed in the NumPy 2.0 release. Use `np.bytes_` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_util_testing.py", line 61, in test_processing
tr1.detrend()
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2027, in detrend
func = _get_function_from_entry_point('detrend', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/core/tests/test_util_testing.py", line 72, in test_nan
tr1.data[0], tr2.data[0] = np.NaN, np.NaN
File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
raise AttributeError(
AttributeError: `np.NaN` was removed in the NumPy 2.0 release. Use `np.nan` instead.
1819
1820 For the example we switch off the automatic pre-filtering so that
1821 the effect of the downsampling routine becomes clearer:
1822
1823 >>> tr = Trace(data=np.arange(10))
1824 >>> tr.stats.sampling_rate
1825 1.0
1826 >>> tr.data
1827 array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9])
1828 >>> tr.decimate(4, strict_length=False,
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.decimate[3]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1853, in decimate
from obspy.signal.filter import integer_decimation
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/trace.py:1828: UnexpectedException
2012 samples between spline nodes.
2013 (uses :func:`obspy.signal.detrend.spline`).
2014
2015 .. rubric:: Example
2016
2017 Apply a third order spline detrend with 500 samples between nodes.
2018
2019 >>> from obspy import read
2020 >>> tr = read()[0]
2021 >>> tr.detrend("spline", order=3, dspline=500)
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.detrend[2]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2027, in detrend
func = _get_function_from_entry_point('detrend', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/trace.py:2021: UnexpectedException
1527 ``'remez_fir'`` (experimental)
1528 Minimax optimal bandpass using Remez algorithm (uses
1529 :func:`obspy.signal.filter.remez_fir`).
1530
1531 .. rubric:: Example
1532
1533 >>> from obspy import read
1534 >>> st = read()
1535 >>> tr = st[0]
1536 >>> tr.filter("highpass", freq=1.0) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.filter[3]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/trace.py:1536: UnexpectedException
2426 * New interpolation method ``lanczos``.
2427
2428
2429 .. rubric:: _`Usage Examples`
2430
2431 >>> from obspy import read
2432 >>> tr = read()[0]
2433 >>> print(tr) # doctest: +ELLIPSIS
2434 BW.RJOB..EHZ | 2009-08-24T00:20:03... - ... | 100.0 Hz, 3000 samples
2435 >>> tr.interpolate(sampling_rate=111.1) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.interpolate[3]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2476, in interpolate
func = _get_function_from_entry_point('interpolate', method)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/trace.py:2435: UnexpectedException
2710 `pitsasim=False` which influence very minor details in detrending
2711 and tapering).
2712
2713 .. rubric:: Example
2714
2715 >>> from obspy import read, read_inventory
2716 >>> st = read()
2717 >>> tr = st[0].copy()
2718 >>> inv = read_inventory()
2719 >>> tr.remove_response(inventory=inv) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.remove_response[4]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 2810, in remove_response
from obspy.signal.invsim import (cosine_taper, cosine_sac_taper,
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/trace.py:2719: UnexpectedException
1687 the signal is assumed to be periodic.
1688
1689 .. rubric:: Example
1690
1691 >>> tr = Trace(data=np.array([0.5, 0, 0.5, 1, 0.5, 0, 0.5, 1]))
1692 >>> len(tr)
1693 8
1694 >>> tr.stats.sampling_rate
1695 1.0
1696 >>> tr.resample(4.0) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: AttributeError('`newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.resample[3]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 237, in skip_if_no_data
return func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1725, in resample
x = rfft(self.data.newbyteorder("="))
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
/workspace/testbed/obspy/core/trace.py:1696: UnexpectedException
1403 raw data is not accessible anymore afterwards. To keep your
1404 original data, use :meth:`~obspy.core.trace.Trace.copy` to create
1405 a copy of your trace object.
1406 This also makes an entry with information on the applied processing
1407 in ``stats.processing`` of this trace.
1408
1409 .. rubric:: Example
1410
1411 >>> from obspy import read
1412 >>> from obspy.signal.invsim import corn_freq_2_paz
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.simulate[1]>", line 1, in <module>
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/trace.py:1412: UnexpectedException
1603
1604 ``'zdetect'``
1605 Z-detector (uses :func:`obspy.signal.trigger.z_detect`).
1606
1607 .. rubric:: Example
1608
1609 >>> from obspy import read
1610 >>> st = read()
1611 >>> tr = st[0]
1612 >>> tr.filter("highpass", freq=1.0) # doctest: +ELLIPSIS
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.trace.Trace.trigger[3]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/trace.py:1612: UnexpectedException
292
293 A "automagic" function searching a given dict of entry points for a valid
294 entry point and returns the function call. Otherwise it will raise a
295 default error message.
296
297 .. rubric:: Example
298
299 >>> _get_function_from_entry_point(
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "signal"\n /workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.core.util.base._get_function_from_entry_point[0]>", line 1, in <module>
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/core/util/base.py:299: UnexpectedException
191
192 :param filename: A test file name to which the path should be returned.
193 :return: Full path to file.
194
195 .. rubric:: Example
196
197 >>> get_example_file('slist.ascii') # doctest: +SKIP
198 /custom/path/to/obspy/io/ascii/tests/data/slist.ascii
199
200 >>> get_example_file('does.not.exists') # doctest: +ELLIPSIS
Differences (unified diff with -expected +actual):
@@ -1,3 +1,16 @@
Traceback (most recent call last):
-...
-OSError: Could not find file does.not.exists ...
+ File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
+ exec(compile(example.source, filename, "single",
+ File "<doctest obspy.core.util.base.get_example_file[1]>", line 1, in <module>
+ get_example_file('does.not.exists') # doctest: +ELLIPSIS
+ File "/workspace/testbed/obspy/core/util/base.py", line 207, in get_example_file
+ mod = __import__("obspy.%s" % module,
+ File "/workspace/testbed/obspy/taup/__init__.py", line 447, in <module>
+ from .tau import TauPyModel # NOQA
+ File "/workspace/testbed/obspy/taup/tau.py", line 14, in <module>
+ from .helper_classes import Arrival
+ File "/workspace/testbed/obspy/taup/helper_classes.py", line 20, in <module>
+ ('top_p', np.float_),
+ File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
+ raise AttributeError(
+AttributeError: `np.float_` was removed in the NumPy 2.0 release. Use `np.float64` instead.
/workspace/testbed/obspy/core/util/base.py:200: DocTestFailure
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/imaging/tests/test_plot.py", line 43, in test_plot
obspy_plot(['--outfile', str(image_path)] + all_files_list)
File "/workspace/testbed/obspy/imaging/scripts/plot.py", line 37, in main
st += read(f, format=args.format)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /tmp/obspy-v_9jsivk
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/imaging/tests/test_plot.py", line 57, in test_plot_no_merge
obspy_plot(['--no-automerge', '--outfile', str(image_path)] +
File "/workspace/testbed/obspy/imaging/scripts/plot.py", line 37, in main
st += read(f, format=args.format)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /tmp/obspy-12fjkv7k
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/imaging/tests/test_scan.py", line 82, in test_scan_dir_no_permission
assert scanner.counter == 2
AssertionError: assert 1 == 2
+ where 1 = <obspy.imaging.scripts.scan.Scanner object at 0x7f02576f61c0>.counter
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/imaging/tests/test_scan.py", line 104, in test_scan_function_and_scanner_class
scanner.plot(path2)
File "/workspace/testbed/obspy/imaging/scripts/scan.py", line 417, in plot
ax.set_xlim(left - 0.05 * x_axis_range,
File "/usr/local/lib/python3.9/site-packages/matplotlib/axes/_base.py", line 3739, in set_xlim
return self.xaxis._set_lim(left, right, emit=emit, auto=auto)
File "/usr/local/lib/python3.9/site-packages/matplotlib/axis.py", line 1236, in _set_lim
v0 = self.axes._validate_converted_limits(v0, self.convert_units)
File "/usr/local/lib/python3.9/site-packages/matplotlib/axes/_base.py", line 3660, in _validate_converted_limits
raise ValueError("Axis limits cannot be NaN or Inf")
ValueError: Axis limits cannot be NaN or Inf
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/imaging/tests/test_scan.py", line 125, in test_scan_plot_by_id_with_wildcard
scanner.parse(get_example_file(filename))
File "/workspace/testbed/obspy/core/util/base.py", line 207, in get_example_file
mod = __import__("obspy.%s" % module,
File "/workspace/testbed/obspy/taup/__init__.py", line 447, in <module>
from .tau import TauPyModel # NOQA
File "/workspace/testbed/obspy/taup/tau.py", line 14, in <module>
from .helper_classes import Arrival
File "/workspace/testbed/obspy/taup/helper_classes.py", line 20, in <module>
('top_p', np.float_),
File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
raise AttributeError(
AttributeError: `np.float_` was removed in the NumPy 2.0 release. Use `np.float64` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/imaging/tests/test_scan.py", line 163, in test_scanner_manually_add_streams
st = read(file_, headonly=True)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /tmp/obspy-rlbfqnhb
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/imaging/tests/test_scan.py", line 198, in test_scan_save_load_npz
scanner.plot(path1)
File "/workspace/testbed/obspy/imaging/scripts/scan.py", line 417, in plot
ax.set_xlim(left - 0.05 * x_axis_range,
File "/usr/local/lib/python3.9/site-packages/matplotlib/axes/_base.py", line 3739, in set_xlim
return self.xaxis._set_lim(left, right, emit=emit, auto=auto)
File "/usr/local/lib/python3.9/site-packages/matplotlib/axis.py", line 1236, in _set_lim
v0 = self.axes._validate_converted_limits(v0, self.convert_units)
File "/usr/local/lib/python3.9/site-packages/matplotlib/axes/_base.py", line 3660, in _validate_converted_limits
raise ValueError("Axis limits cannot be NaN or Inf")
ValueError: Axis limits cannot be NaN or Inf
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ah/tests/test_core.py", line 63, in test_read
st = read(testfile)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
122 :type headonly: bool, optional
123 :param headonly: If set to True, read only the head. This is most useful
124 for scanning available data in huge (temporary) data sets.
125 :rtype: :class:`~obspy.core.stream.Stream`
126 :return: A ObsPy Stream object.
127
128 .. rubric:: Example
129
130 >>> from obspy import read
131 >>> st = read('/path/to/slist.ascii')
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.ascii.core._read_slist[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/ascii/core.py:131: UnexpectedException
190 :type headonly: bool, optional
191 :param headonly: If set to True, read only the headers. This is most useful
192 for scanning available data in huge (temporary) data sets.
193 :rtype: :class:`~obspy.core.stream.Stream`
194 :return: A ObsPy Stream object.
195
196 .. rubric:: Example
197
198 >>> from obspy import read
199 >>> st = read('/path/to/tspair.ascii')
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.ascii.core._read_tspair[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/ascii/core.py:199: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ascii/tests/test_ascii.py", line 642, in test_float_sampling_rates_write_and_read
tr.write(tempfile, format=format)
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1456, in write
write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/ascii/core.py", line 352, in _write_slist
np.savetxt(fh, data, delimiter=b'\t',
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b'%d'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ascii/tests/test_ascii.py", line 692, in test_regression_against_mseed2ascii
read(mseed_file).write(tf.name, format="TSPAIR")
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ascii/tests/test_ascii.py", line 449, in test_write_slist
_write_slist(stream_orig, tmpfile)
File "/workspace/testbed/obspy/io/ascii/core.py", line 352, in _write_slist
np.savetxt(fh, data, delimiter=b'\t',
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b'%+.10e'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ascii/tests/test_ascii.py", line 544, in test_write_slist_custom_fmt_custom
_write_slist(stream_orig, tmpfile, custom_fmt='%+r')
File "/workspace/testbed/obspy/io/ascii/core.py", line 352, in _write_slist
np.savetxt(fh, data, delimiter=b'\t',
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b'%+r'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ascii/tests/test_ascii.py", line 497, in test_write_slist_custom_fmt_float
_write_slist(stream_orig, tmpfile, custom_fmt='%3.14f')
File "/workspace/testbed/obspy/io/ascii/core.py", line 352, in _write_slist
np.savetxt(fh, data, delimiter=b'\t',
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b'%3.14f'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ascii/tests/test_ascii.py", line 568, in test_write_slist_file_multiple_traces
_write_slist(stream_orig, tmpfile)
File "/workspace/testbed/obspy/io/ascii/core.py", line 352, in _write_slist
np.savetxt(fh, data, delimiter=b'\t',
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b'%d'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/ascii/tests/test_ascii.py", line 623, in test_write_small_trace
tr.write(tempfile, format=format)
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1456, in write
write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/ascii/core.py", line 352, in _write_slist
np.savetxt(fh, data, delimiter=b'\t',
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b'%d'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/css/tests/test_core.py", line 96, in test_css_read_via_obspy
st = read(self.filename_css)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/css/tests/test_core.py", line 115, in test_nnsa_kb_core_read_via_obspy
st = read(self.filename_nnsa)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
019 Reading DMX is handled by using ObsPy's standard
020 :func:`~obspy.core.stream.read` function. The format can be detected
021 automatically, however setting the ``format`` parameter as "DMX" lead to a
022 speed up.
023 One optional keyword argument is available: ``station``. It is automatically
024 passed to the :func:`obspy.io.dmx.core._read_dmx`. Its format
025
026 >>> from obspy import read
027 >>> # these two are equivalent, but the second case should be faster:
028 >>> st = read("/path/to/131114_090600.dmx")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.dmx[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/dmx/__init__.py:28: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/dmx/tests/test_core.py", line 82, in test_check_data_content_sum
st = read(filename)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/dmx/tests/test_core.py", line 30, in test_read_via_obspy
st = read(filename)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/dmx/tests/test_core.py", line 68, in test_read_with_station
st = read(filename, station='EMPL')
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
012 GNU Lesser General Public License, Version 3
013 (https://www.gnu.org/copyleft/lesser.html)
014
015 Reading
016 -------
017 Similar to reading any other waveform data format using :mod:`obspy.core`
018 The format will be determined automatically.
019
020 >>> from obspy import read
021 >>> st = read("/path/to/20160603_1955n.gcf")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.gcf[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/gcf/__init__.py:21: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/gcf/tests/test_core.py", line 125, in test_merge_gcf_stream
st1 = read(filename, headonly=True, channel_prefix="HN")
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/gcf/tests/test_core.py", line 108, in test_read_channel_prefix_via_obspy
st = read(filename, headonly=True, channel_prefix="HN")
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/gcf/tests/test_core.py", line 55, in test_read_head_via_obspy
st = read(filename, headonly=True)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/gcf/tests/test_core.py", line 36, in test_read_via_obspy
st = read(filename)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/gcf/tests/test_core.py", line 150, in test_sps_d
st = read(filename, headonly=True, channel_prefix="HN")
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
016 :license:
017 GNU Lesser General Public License, Version 3
018 (https://www.gnu.org/copyleft/lesser.html)
019
020 Reading waveform data
021 ---------------------
022 Similar to reading any other waveform data format using :mod:`obspy.core`:
023
024 >>> from obspy import read
025 >>> st = read("/path/to/loc_RJOB20050831023349.z")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.gse2[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/gse2/__init__.py:25: UnexpectedException
015 :license:
016 GNU Lesser General Public License, Version 3
017 (https://www.gnu.org/copyleft/lesser.html)
018
019 Reading
020 -------
021 Similar to reading any other waveform data format using obspy.core:
022
023 >>> from obspy import read
024 >>> st = read("/path/to/BI008_MEMA-04823.evt", apply_calib=True)
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.kinemetrics[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/kinemetrics/__init__.py:24: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/kinemetrics/tests/test_core.py", line 78, in test_read_via_obspy
st = read(filename, apply_calib=True)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/kinemetrics/tests/test_core.py", line 127, in test_reading_via_obspy_and_bytesio
st = read(buf, apply_calib=True)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 623, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
022
023 Reading
024 -------
025
026 Reading MiniSEED (and the data part of full SEED files) is handled by using
027 ObsPy's standard :func:`~obspy.core.stream.read` function. The format is
028 detected automatically.
029
030 >>> from obspy import read
031 >>> st = read("/path/to/test.mseed")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.mseed[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/mseed/__init__.py:31: UnexpectedException
081
082 Example
083 -------
084
085 Reading K-NET/KiK-net files is handled by using ObsPy's
086 standard :func:`~obspy.core.stream.read` function. The format is detected
087 automatically.
088
089 >>> from obspy import read
090 >>> st = read('/path/to/test.knet')
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.nied[5]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/nied/__init__.py:90: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/nied/tests/test_knet_reading.py", line 22, in test_read_knet_ascii
tr = read(testfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/nied/tests/test_knet_reading.py", line 56, in test_read_knet_ascii_from_bytes_io
tr = read(buf)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 623, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/nied/tests/test_knet_reading.py", line 37, in test_read_knet_ascii_from_open_files
tr = read(fh)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 623, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/nied/tests/test_knet_reading.py", line 72, in test_station_name_hack
tr = read(testfile, convert_stnm=True)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /tmp/obspy-4eoa3_h7
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 850, in pytest_runtest_call
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 900, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/skipping.py", line 263, in pytest_runtest_call
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 178, in pytest_runtest_call
item.runtest()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1671, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 157, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/workspace/testbed/obspy/io/nordic/tests/test_nordic.py", line 255, in test_blanksfile
st.write(testing_path, format='MSEED')
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
048
049 :type filename: str
050 :param filename: PDAS file to be read.
051 :rtype: :class:`~obspy.core.stream.Stream`
052 :return: An ObsPy Stream object.
053
054 .. rubric:: Example
055
056 >>> from obspy import read
057 >>> st = read("/path/to/p1246001.108")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.pdas.core._read_pdas[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/pdas/core.py:57: UnexpectedException
044 .KW1..EH0 | 2015-10-09T22:51:11.675000Z - ... | 200.0 Hz, 2743 samples
045 .KW1..EH1 | 2015-10-09T22:50:51.000000Z - ... | 200.0 Hz, 3107 samples
046 .KW1..EH1 | 2015-10-09T22:51:05.925000Z - ... | 200.0 Hz, 768 samples
047 .KW1..EH1 | 2015-10-09T22:51:10.765000Z - ... | 200.0 Hz, 2925 samples
048 .KW1..EH2 | 2015-10-09T22:50:51.000000Z - ... | 200.0 Hz, 3405 samples
049 .KW1..EH2 | 2015-10-09T22:51:08.415000Z - ... | 200.0 Hz, 3395 samples
050
051 Network, location and component codes can be specified during reading:
052
053 >>> st = read("/path/to/225051000_00008656", network="BW", location="",
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.reftek[4]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/reftek/__init__.py:53: UnexpectedException
044 Several key word arguments are available: ``headonly``, ``starttime``,
045 ``endtime``, ``merge``, ``contacts_north``, ``details``. They are passed to the
046 :func:`obspy.io.rg16.core._read_rg16` function so refer to it for details to
047 each parameter.
048
049 >>> import obspy
050 >>> from obspy.core.util import get_example_file
051 >>> filename = get_example_file('three_chans_six_traces.fcnt')
052 >>> # these are all equivalent:
053 >>> st = obspy.read(filename)
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.rg16[3]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/rg16/__init__.py:53: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/rg16/tests/test_read_rg16.py", line 35, in test_reading_rg16_files
st_1 = read(fcnt_file)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/workspace/testbed/obspy/core/stream.py", line 1449, in write
write_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/rg16/tests/test_read_rg16.py", line 408, in test_can_write
st.write(bytstr, 'mseed')
File "/workspace/testbed/obspy/core/stream.py", line 1454, in write
raise ValueError(msg % (format,
ValueError: Writing format "MSEED" is not supported. Supported types: MSEED, SAC, GSE2, SACXY, Q, SH_ASC, SLIST, TSPAIR, PICKLE, SEGY, SU, WAV, AH
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/rg16/tests/test_read_rg16.py", line 410, in test_can_write
self.fail('Failed to write to mseed!')
File "/usr/local/lib/python3.9/unittest/case.py", line 676, in fail
raise self.failureException(msg)
AssertionError: Failed to write to mseed!
017 (LANL) and copyrighted for Los Alamos National Security, LLC under
018 LA-CC-15-051.
019
020 Reading
021 -------
022 Similar to reading any other waveform data format using
023 :func:`~obspy.core.stream.read()`:
024
025 >>> from obspy import read
026 >>> st = read('/path/to/test.sac', debug_headers=True)
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.sac[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/sac/__init__.py:26: UnexpectedException
224 values are not synchronized with the Stream object itself and won't
225 be used during writing of a SAC file! Defaults to ``False``.
226 :type debug_headers: bool
227 :rtype: :class:`~obspy.core.stream.Stream`
228 :return: A ObsPy Stream object.
229
230 .. rubric:: Example
231
232 >>> from obspy import read
233 >>> st = read("/path/to/testxy.sac")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.sac.core._internal_read_sac_xy[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/sac/core.py:233: UnexpectedException
326 :param fsize: Check if file size is consistent with theoretical size
327 from header. Defaults to ``True``.
328 :type fsize: bool
329 :rtype: :class:`~obspy.core.stream.Stream`
330 :return: A ObsPy Stream object.
331
332 .. rubric:: Example
333
334 >>> from obspy import read
335 >>> st = read("/path/to/test.sac")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.sac.core._read_sac[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/sac/core.py:335: UnexpectedException
186 values are not synchronized with the Stream object itself and won't
187 be used during writing of a SAC file! Defaults to ``False``.
188 :type debug_headers: bool
189 :rtype: :class:`~obspy.core.stream.Stream`
190 :return: A ObsPy Stream object.
191
192 .. rubric:: Example
193
194 >>> from obspy import read
195 >>> st = read("/path/to/testxy.sac")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.sac.core._read_sac_xy[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/sac/core.py:195: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 910, in test_always_sac_reftime
tr1 = read(tf)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 623, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 824, in test_decimate_resample
tr.decimate(2)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1849, in decimate
self.filter('lowpass_cheby_2', freq=freq, maxorder=12)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/trace.py", line 282, in _add_processing_info
result = func(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 226, in raise_if_masked
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/trace.py", line 1550, in filter
func = _get_function_from_entry_point('filter', type)
File "/workspace/testbed/obspy/core/util/base.py", line 330, in _get_function_from_entry_point
func = buffered_load_entry_point(entry_point.dist.key,
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/signal/__init__.py", line 197, in <module>
from .spectral_estimation import PPSD
File "/workspace/testbed/obspy/signal/spectral_estimation.py", line 42, in <module>
from obspy.signal.invsim import cosine_taper
File "/workspace/testbed/obspy/signal/invsim.py", line 33, in <module>
from obspy.signal import util
File "/workspace/testbed/obspy/signal/util.py", line 19, in <module>
from obspy.signal.headers import clibsignal
File "/workspace/testbed/obspy/signal/headers.py", line 13, in <module>
clibsignal = _load_cdll("signal")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "signal"
/workspace/testbed/obspy/lib/signal.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/signal.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 267, in test_default_values
tr = read(self.file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 926, in test_encoding_flag
tr0 = read(self.file_encode, encoding='cp1252')[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 434, in test_issue390
tr = read(self.file, headonly=True, debug_headers=True)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 338, in test_issue_156
st = read(sac_file)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 250, in test_iztype11
tr = read(sod_file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 813, in test_merge_sac_obspy_headers
tr1 = read(tempfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 370, in test_not_used_but_given_headers
tr1 = read(self.file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 409, in test_null_terminated_strings
tr = read(null_file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 192, in test_read_and_write_via_obspy
tr = read(self.file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 113, in test_read_big_endian_via_obspy
tr = read(self.filebe, format='SAC')[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 422, in _read_from_plugin
list_obj = read_format(filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 344, in _read_sac
return _internal_read_sac(buf=fh, headonly=headonly,
File "/workspace/testbed/obspy/io/sac/core.py", line 389, in _internal_read_sac
sac = SACTrace.read(buf, headonly=headonly, ascii=False,
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1086, in read
hf, hi, hs, data = _io.read_sac(source, headonly=headonly,
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 144, in read_sac
hf = hf.newbyteorder('S')
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 589, in test_read_via_obspy_from_bytes_io
tr = read(buf)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 623, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 470, in test_read_with_fsize
self.assertRaises(SacError, read, longer_file)
File "/usr/local/lib/python3.9/unittest/case.py", line 739, in assertRaises
return context.handle('assertRaises', args, kwargs)
File "/usr/local/lib/python3.9/unittest/case.py", line 201, in handle
callable_obj(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 65, in test_read_write_via_obspy
tr1 = read(tempfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 416, in write_sac_ascii
np.savetxt(f, data[5 * rows:], delimiter=b'\t')
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1602, in savetxt
format = delimiter.join(fmt)
TypeError: sequence item 0: expected a bytes-like object, str found
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 97, in test_read_write_xy_via_obspy
tr.write(tempfile, format='SACXY')
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1456, in write
write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 282, in _write_sac_xy
_internal_write_sac_xy(trace, fh, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 302, in _internal_write_sac_xy
sac.write(buf, ascii=True, flush_headers=False)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1135, in write
_io.write_sac_ascii(dest, self._hf, self._hi, self._hs, data)
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 420, in write_sac_ascii
raise SacIOError("Cannot write trace values: " + f.name)
obspy.io.sac.util.SacIOError: Cannot write trace values: /tmp/obspy-kvk1sj9a.tmp
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 416, in write_sac_ascii
np.savetxt(f, data[5 * rows:], delimiter=b'\t')
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1602, in savetxt
format = delimiter.join(fmt)
TypeError: sequence item 0: expected a bytes-like object, str found
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 622, in test_read_xy_write_xy_from_bytes_io
_write_sac_xy(st, fh)
File "/workspace/testbed/obspy/io/sac/core.py", line 272, in _write_sac_xy
_internal_write_sac_xy(stream[0], filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 302, in _internal_write_sac_xy
sac.write(buf, ascii=True, flush_headers=False)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1135, in write
_io.write_sac_ascii(dest, self._hf, self._hi, self._hs, data)
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 420, in write_sac_ascii
raise SacIOError("Cannot write trace values: " + f.name)
AttributeError: '_io.BytesIO' object has no attribute 'name'
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 416, in write_sac_ascii
np.savetxt(f, data[5 * rows:], delimiter=b'\t')
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1602, in savetxt
format = delimiter.join(fmt)
TypeError: sequence item 0: expected a bytes-like object, str found
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 639, in test_read_xy_write_xy_from_open_file_binary_mode
_write_sac_xy(st, tf)
File "/workspace/testbed/obspy/io/sac/core.py", line 272, in _write_sac_xy
_internal_write_sac_xy(stream[0], filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 302, in _internal_write_sac_xy
sac.write(buf, ascii=True, flush_headers=False)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1135, in write
_io.write_sac_ascii(dest, self._hf, self._hi, self._hs, data)
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 420, in write_sac_ascii
raise SacIOError("Cannot write trace values: " + f.name)
obspy.io.sac.util.SacIOError: Cannot write trace values: /tmp/obspy-wszhfpdy.tmp
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 416, in write_sac_ascii
np.savetxt(f, data[5 * rows:], delimiter=b'\t')
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1602, in savetxt
format = delimiter.join(fmt)
TypeError: sequence item 0: expected a bytes-like object, str found
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 82, in test_read_xy_write_xy_via_obspy
tr.write(tempfile, format='SACXY')
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1456, in write
write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 282, in _write_sac_xy
_internal_write_sac_xy(trace, fh, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 302, in _internal_write_sac_xy
sac.write(buf, ascii=True, flush_headers=False)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1135, in write
_io.write_sac_ascii(dest, self._hf, self._hi, self._hs, data)
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 420, in write_sac_ascii
raise SacIOError("Cannot write trace values: " + f.name)
obspy.io.sac.util.SacIOError: Cannot write trace values: /tmp/obspy-h5ypr4g6.tmp
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 279, in test_reference_time
tr = read(self.fileseis)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 887, in test_sac_file_from_new_header
tr1 = read(tf)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 623, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 127, in test_swap_bytes_via_obspy
trbe = read(self.filebe, format='SAC')[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 422, in _read_from_plugin
list_obj = read_format(filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 344, in _read_sac
return _internal_read_sac(buf=fh, headonly=headonly,
File "/workspace/testbed/obspy/io/sac/core.py", line 389, in _internal_read_sac
sac = SACTrace.read(buf, headonly=headonly, ascii=False,
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1086, in read
hf, hi, hs, data = _io.read_sac(source, headonly=headonly,
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 144, in read_sac
hf = hf.newbyteorder('S')
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 307, in test_undefined_b
tr = read(self.file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 778, in test_valid_sac_from_minimal_existing_sac_header
tr1 = read(tempfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 416, in write_sac_ascii
np.savetxt(f, data[5 * rows:], delimiter=b'\t')
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1602, in savetxt
format = delimiter.join(fmt)
TypeError: sequence item 0: expected a bytes-like object, str found
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 361, in test_write_sac_xy_with_minimum_stats
tr.write(sac_file, 'SACXY')
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1456, in write
write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 282, in _write_sac_xy
_internal_write_sac_xy(trace, fh, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 302, in _internal_write_sac_xy
sac.write(buf, ascii=True, flush_headers=False)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1135, in write
_io.write_sac_ascii(dest, self._hf, self._hi, self._hs, data)
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 420, in write_sac_ascii
raise SacIOError("Cannot write trace values: " + f.name)
obspy.io.sac.util.SacIOError: Cannot write trace values: /tmp/obspy-j8zlxyy_.tmp
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 416, in write_sac_ascii
np.savetxt(f, data[5 * rows:], delimiter=b'\t')
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1602, in savetxt
format = delimiter.join(fmt)
TypeError: sequence item 0: expected a bytes-like object, str found
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 423, in test_write_small_trace
tr.write(tempfile, format=format)
File "/workspace/testbed/obspy/core/trace.py", line 999, in write
Stream([self]).write(filename, format, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 1456, in write
write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 282, in _write_sac_xy
_internal_write_sac_xy(trace, fh, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 302, in _internal_write_sac_xy
sac.write(buf, ascii=True, flush_headers=False)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1135, in write
_io.write_sac_ascii(dest, self._hf, self._hi, self._hs, data)
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 420, in write_sac_ascii
raise SacIOError("Cannot write trace values: " + f.name)
obspy.io.sac.util.SacIOError: Cannot write trace values: /tmp/obspy-lt493ugy.tmp
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 172, in test_write_via_obspy
tr = read(tempfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 600, in test_write_via_obspy_to_bytes_io
tr = read(self.file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 416, in write_sac_ascii
np.savetxt(f, data[5 * rows:], delimiter=b'\t')
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1602, in savetxt
format = delimiter.join(fmt)
TypeError: sequence item 0: expected a bytes-like object, str found
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 742, in test_writing_to_file_like_objects_with_obspy
st.write(fh, format="sacxy")
File "/workspace/testbed/obspy/core/stream.py", line 1456, in write
write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 272, in _write_sac_xy
_internal_write_sac_xy(stream[0], filename, **kwargs)
File "/workspace/testbed/obspy/io/sac/core.py", line 302, in _internal_write_sac_xy
sac.write(buf, ascii=True, flush_headers=False)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1135, in write
_io.write_sac_ascii(dest, self._hf, self._hi, self._hs, data)
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 420, in write_sac_ascii
raise SacIOError("Cannot write trace values: " + f.name)
AttributeError: '_io.BytesIO' object has no attribute 'name'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_core.py", line 919, in test_wrong_encoding
tr0 = read(self.file_encode)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_sactrace.py", line 187, in test_lcalda
meters, az, baz = gps2dist_azimuth(evla, evlo, stla, stlo)
File "/workspace/testbed/obspy/geodetics/base.py", line 268, in gps2dist_azimuth
if np.alltrue(np.isnan(values)):
File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
raise AttributeError(
AttributeError: `np.alltrue` was removed in the NumPy 2.0 release. Use `np.all` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_sactrace.py", line 222, in test_propagate_modified_stats_strings_to_sactrace
tr = read(self.fileseis)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sac/tests/test_sactrace.py", line 80, in test_read_sac_byteorder
sac = SACTrace.read(self.filebe)
File "/workspace/testbed/obspy/io/sac/sactrace.py", line 1086, in read
hf, hi, hs, data = _io.read_sac(source, headonly=headonly,
File "/workspace/testbed/obspy/io/sac/arrayio.py", line 144, in read_sac
hf = hf.newbyteorder('S')
AttributeError: `newbyteorder` was removed from the ndarray class in NumPy 2.0. Use `arr.view(arr.dtype.newbyteorder(order))` instead.
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/scardec/tests/test_core.py", line 143, in test_read_and_write_scardec_from_bytes_io
cat.write(buf2, format="SCARDEC")
File "/workspace/testbed/obspy/core/event/catalog.py", line 506, in write
return write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/scardec/core.py", line 327, in _write_scardec
return _buffer_proxy(filename_or_buf, _internal_write_scardec,
File "/workspace/testbed/obspy/io/scardec/core.py", line 64, in _buffer_proxy
ret_val = function(filename_or_buf, *args, **kwargs)
File "/workspace/testbed/obspy/io/scardec/core.py", line 344, in _internal_write_scardec
_internal_write_single_scardec(buf, event)
File "/workspace/testbed/obspy/io/scardec/core.py", line 453, in _internal_write_single_scardec
np.savetxt(buf, np.asarray([times, samples]).T,
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b' %16.9E %16.9E'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/scardec/tests/test_core.py", line 50, in test_read_and_write_scardec_from_files
cat.write(temp_filename, format="SCARDEC")
File "/workspace/testbed/obspy/core/event/catalog.py", line 506, in write
return write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/scardec/core.py", line 327, in _write_scardec
return _buffer_proxy(filename_or_buf, _internal_write_scardec,
File "/workspace/testbed/obspy/io/scardec/core.py", line 70, in _buffer_proxy
return function(fh, *args, **kwargs)
File "/workspace/testbed/obspy/io/scardec/core.py", line 344, in _internal_write_scardec
_internal_write_single_scardec(buf, event)
File "/workspace/testbed/obspy/io/scardec/core.py", line 453, in _internal_write_single_scardec
np.savetxt(buf, np.asarray([times, samples]).T,
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b' %16.9E %16.9E'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/scardec/tests/test_core.py", line 97, in test_read_and_write_scardec_from_open_files
cat.write(tf, format="SCARDEC")
File "/workspace/testbed/obspy/core/event/catalog.py", line 506, in write
return write_format(self, filename, **kwargs)
File "/workspace/testbed/obspy/io/scardec/core.py", line 327, in _write_scardec
return _buffer_proxy(filename_or_buf, _internal_write_scardec,
File "/workspace/testbed/obspy/io/scardec/core.py", line 64, in _buffer_proxy
ret_val = function(filename_or_buf, *args, **kwargs)
File "/workspace/testbed/obspy/io/scardec/core.py", line 344, in _internal_write_scardec
_internal_write_single_scardec(buf, event)
File "/workspace/testbed/obspy/io/scardec/core.py", line 453, in _internal_write_single_scardec
np.savetxt(buf, np.asarray([times, samples]).T,
File "/usr/local/lib/python3.9/site-packages/numpy/lib/_npyio_impl.py", line 1610, in savetxt
raise ValueError('invalid fmt: %r' % (fmt,))
ValueError: invalid fmt: b' %16.9E %16.9E'
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/seg2/tests/test_seg2.py", line 99, in test_read_data_format_2
st = read(basename + ".seg2.gz")
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 194, in uncompress_file
stream = func(tempfile.name, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/seg2/tests/test_seg2.py", line 124, in test_read_data_format_3
st = read(basename + ".seg2")
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
053
054 Due to the fact that a single SEG Y file can contain several tens of thousands
055 of traces and each trace will be a :class:`~obspy.core.trace.Trace` instance
056 which in turn will contain other objects these methods are quite slow and
057 memory intensive.
058
059 To somewhat rectify this issue all SEG Y specific trace header attributes are
060 only unpacked on demand by default.
061
062 >>> from obspy.io.segy.core import _read_segy
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "segy"\n /workspace/testbed/obspy/lib/segy.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/segy.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/segy.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.segy[0]>", line 1, in <module>
File "/workspace/testbed/obspy/io/segy/core.py", line 19, in <module>
from .header import (BINARY_FILE_HEADER_FORMAT, DATA_SAMPLE_FORMAT_CODE_DTYPE,
File "/workspace/testbed/obspy/io/segy/header.py", line 8, in <module>
from . import pack, unpack
File "/workspace/testbed/obspy/io/segy/unpack.py", line 22, in <module>
from .util import clibsegy
File "/workspace/testbed/obspy/io/segy/util.py", line 8, in <module>
clibsegy = _load_cdll("segy")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "segy"
/workspace/testbed/obspy/lib/segy.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/segy.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/segy.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/segy/__init__.py:62: UnexpectedException
014
015 Reading
016 -------
017 Importing SEISAN files is done similar to reading any other waveform data
018 format within ObsPy by using the :func:`~obspy.core.stream.read()` method of
019 the :mod:`obspy.core` module. Example seismogram files may be found at
020 https://examples.obspy.org.
021
022 >>> from obspy import read
023 >>> st = read("/path/to/2001-01-13-1742-24S.KONO__004")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.seisan[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/seisan/__init__.py:23: UnexpectedException
114
115 :type filename: str
116 :param filename: SEISAN file to be read.
117 :rtype: :class:`~obspy.core.stream.Stream`
118 :return: A ObsPy Stream object.
119
120 .. rubric:: Example
121
122 >>> from obspy import read
123 >>> st = read("/path/to/2001-01-13-1742-24S.KONO__004")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.seisan.core._read_seisan[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/seisan/core.py:123: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/seisan/tests/test_core.py", line 191, in test_read_obspy
st1 = read(os.path.join(self.path,
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
014
015 Reading
016 -------
017 Importing Q or ASC files is done similar to reading any other waveform data
018 format within ObsPy by using the :func:`~obspy.core.stream.read()` method of
019 the :mod:`obspy.core` module. Examples seismograms files may be found at
020 https://examples.obspy.org.
021
022 >>> from obspy import read
023 >>> st = read("/path/to/QFILE-TEST-ASC.ASC")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.sh[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/sh/__init__.py:23: UnexpectedException
112 :type length: int, optional
113 :param length: If ``skip`` is used, ``length`` defines the number of values
114 to be read.
115 :rtype: :class:`~obspy.core.stream.Stream`
116 :return: A ObsPy Stream object.
117
118 .. rubric:: Example
119
120 >>> from obspy import read
121 >>> st = read("/path/to/QFILE-TEST-ASC.ASC")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.sh.core._read_asc[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/sh/core.py:121: UnexpectedException
355 ObsPy assumes that the corresponding data file is within the same directory
356 if the ``data_directory`` parameter is not set. Otherwise it will search
357 in the given ``data_directory`` for a file with the `QBN` file extension.
358 This function should NOT be called directly, it registers via the
359 ObsPy :func:`~obspy.core.stream.read` function, call this instead.
360
361 .. rubric:: Example
362
363 >>> from obspy import read
364 >>> st = read("/path/to/QFILE-TEST.QHD")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.sh.core._read_q[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/sh/core.py:364: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sh/tests/test_core.py", line 294, in test_header_whitespaces
tr2 = read(tempfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sh/tests/test_core.py", line 154, in test_read_and_write_multi_channel_asc_file_via_obspy
stream2 = read(tempfile)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sh/tests/test_core.py", line 210, in test_read_and_write_multi_channel_q_file_via_obspy
stream2 = read(tempfile)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/sh/tests/test_core.py", line 280, in test_write_long_header
tr2 = read(tempfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
013
014 Reading
015 -------
016 Importing WAV files is done similar to reading any other waveform data
017 format within ObsPy by using the :func:`~obspy.core.stream.read()` method of
018 the :mod:`obspy.core` module. Examples seismograms files may be found at
019 https://examples.obspy.org.
020
021 >>> from obspy import read
022 >>> st = read("/path/to/3cssan.near.8.1.RNON.wav")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.wav[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/wav/__init__.py:22: UnexpectedException
075
076 :type filename: str
077 :param filename: Audio WAV file to be read.
078 :rtype: :class:`~obspy.core.stream.Stream`
079 :return: A ObsPy Stream object.
080
081 .. rubric:: Example
082
083 >>> from obspy import read
084 >>> st = read("/path/to/3cssan.near.8.1.RNON.wav")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.wav.core._read_wav[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/wav/core.py:84: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/wav/tests/test_core.py", line 70, in test_read_and_write_via_obspy
tr3 = read(testfile)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/wav/tests/test_core.py", line 46, in test_read_head_via_obspy
tr = read(self.file, headonly=True)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/wav/tests/test_core.py", line 33, in test_read_via_obspy
tr = read(self.file)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/wav/tests/test_core.py", line 114, in test_write_stream_via_obspy
tr30 = read(testfile0)[0]
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/io/win/tests/test_core.py", line 28, in test_read_via_obspy
st = read(filename)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
140 :type headonly: bool, optional
141 :param headonly: If set to True, read only the head. This is most useful
142 for scanning available data in huge (temporary) data sets.
143 :rtype: :class:`~obspy.core.stream.Stream`
144 :return: A ObsPy Stream object.
145
146 .. rubric:: Example
147
148 >>> from obspy import read
149 >>> st = read("/path/to/YAYT_BHZ_20021223.124800")
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.io.y.core._read_y[1]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/io/y/core.py:149: UnexpectedException
058 RtTrace object (step 3) which will automatically process any appended data
059 chunks.
060
061 1. Read first trace of example SAC data file and extract contained time
062 offset and epicentral distance of an earthquake::
063
064 >>> from obspy.realtime import RtTrace
065 >>> from obspy import read
066 >>> from obspy.realtime.signal import calculate_mwp_mag
067 >>> data_trace = read('/path/to/II.TLY.BHZ.SAC')[0]
UNEXPECTED EXCEPTION: ImportError('Could not load shared library "mseed"\n /workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory\n /workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory\n Current directory: /workspace/testbed/obspy\n Directory listing of lib directory:\n /workspace/testbed/obspy/lib/__init__.py\n /workspace/testbed/obspy/lib/__pycache__')
Traceback (most recent call last):
File "/usr/local/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.realtime.rttrace.RtTrace[3]>", line 1, in <module>
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
/workspace/testbed/obspy/realtime/rttrace.py:67: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1128, in execute
result = ihook.pytest_fixture_setup(fixturedef=self, request=request)
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/setuponly.py", line 36, in pytest_fixture_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 344, in from_call
result: TResult | None = func()
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 246, in <lambda>
lambda: runtest_hook(item=item, **kwds), when=when, reraise=reraise
File "/usr/local/lib/python3.9/site-packages/pluggy/_hooks.py", line 512, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_manager.py", line 120, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 167, in _multicall
raise exception
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/logging.py", line 843, in pytest_runtest_setup
yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/_pytest/capture.py", line 895, in pytest_runtest_setup
return (yield)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 139, in _multicall
teardown.throw(exception)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 53, in run_old_style_hookwrapper
return result.get_result()
File "/usr/local/lib/python3.9/site-packages/pluggy/_result.py", line 103, in get_result
raise exc.with_traceback(tb)
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 38, in run_old_style_hookwrapper
res = yield
File "/usr/local/lib/python3.9/site-packages/pluggy/_callers.py", line 121, in _multicall
res = hook_impl.function(*args)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 164, in pytest_runtest_setup
item.session._setupstate.setup(item)
File "/usr/local/lib/python3.9/site-packages/_pytest/runner.py", line 514, in setup
col.setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 220, in setup
super().setup()
File "/usr/local/lib/python3.9/site-packages/_pytest/python.py", line 1674, in setup
self._request._fillfixtures()
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 720, in _fillfixtures
item.funcargs[argname] = self.getfixturevalue(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 549, in getfixturevalue
fixturedef = self._get_active_fixturedef(argname)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 640, in _get_active_fixturedef
fixturedef.execute(request=subrequest)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1108, in execute
raise exc.with_traceback(exc_tb)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 1196, in pytest_fixture_setup
result = call_fixture_func(fixturefunc, request, kwargs)
File "/usr/local/lib/python3.9/site-packages/_pytest/fixtures.py", line 923, in call_fixture_func
fixture_result = next(generator)
File "/usr/local/lib/python3.9/site-packages/_pytest/unittest.py", line 148, in unittest_setup_class_fixture
setup()
File "/workspace/testbed/obspy/realtime/tests/test_signal.py", line 27, in setUpClass
cls.orig_trace = read(os.path.join(os.path.dirname(__file__), 'data',
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/scripts/tests/test_print.py", line 19, in test_print
obspy_print(self.all_files)
File "/workspace/testbed/obspy/scripts/print.py", line 31, in main
st += read(f, format=args.format)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__
Traceback (most recent call last):
File "/usr/local/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/local/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/local/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/workspace/testbed/obspy/scripts/tests/test_print.py", line 28, in test_print_nomerge
obspy_print(['--no-merge'] + self.all_files)
File "/workspace/testbed/obspy/scripts/print.py", line 31, in main
st += read(f, format=args.format)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "/workspace/testbed/obspy/core/util/base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "/usr/local/lib/python3.9/site-packages/decorator.py", line 235, in fun
return caller(func, *(extras + args), **kw)
File "/workspace/testbed/obspy/core/util/decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "/workspace/testbed/obspy/core/stream.py", line 249, in _read
stream, format = _read_from_plugin('waveform', filename, format=format,
File "/workspace/testbed/obspy/core/util/base.py", line 384, in _read_from_plugin
is_format = buffered_load_entry_point(
File "/workspace/testbed/obspy/core/util/misc.py", line 600, in buffered_load_entry_point
_ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point
return ep.load()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2450, in load
return self.resolve()
File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 2456, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/workspace/testbed/obspy/io/mseed/core.py", line 16, in <module>
from . import (util, InternalMSEEDError, ObsPyMSEEDFilesizeTooSmallError,
File "/workspace/testbed/obspy/io/mseed/util.py", line 20, in <module>
from .headers import (ENCODINGS, ENDIAN, FIXED_HEADER_ACTIVITY_FLAGS,
File "/workspace/testbed/obspy/io/mseed/headers.py", line 17, in <module>
__clibmseed = _load_cdll("mseed")
File "/workspace/testbed/obspy/core/util/libnames.py", line 58, in _load_cdll
raise ImportError('\n '.join([
ImportError: Could not load shared library "mseed"
/workspace/testbed/obspy/lib/mseed.cpython-39-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.abi3.so: cannot open shared object file: No such file or directory
/workspace/testbed/obspy/lib/mseed.so: cannot open shared object file: No such file or directory
Current directory: /workspace/testbed/obspy
Directory listing of lib directory:
/workspace/testbed/obspy/lib/__init__.py
/workspace/testbed/obspy/lib/__pycache__

Skipped tests (32)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_local Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_combined_station_event_plot Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_local Skipped: cartopy not installed
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_with_geographiclib Skipped: Module geographiclib is not installed
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_issue_375 Skipped: Module geographiclib is not installed
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_with_extra_field Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_with_extra_field Skipped: pyshp not installed
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option

Slowest tests (20)

Runtime Test
1.568s io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
1.424s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_huge
1.258s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_tiny
1.251s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces
1.025s imaging/tests/test_source.py::TestRadPattern::test_farfield_with_quiver
0.803s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_horizontal_section
0.801s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_5_traces
0.631s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_vertical_section
0.616s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_colored_section
0.604s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_positive_section
0.601s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_default_section
0.597s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_negative_section
0.589s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_azim_section
0.573s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_ref_time_section
0.568s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_horizontal_section
0.487s core/tests/test_stream.py::TestStream::test_spectrogram
0.471s imaging/tests/test_waveform.py::TestWaveformPlot::test_data_remains_unchanged
0.471s imaging/tests/test_beachball.py::TestBeachballPlot::test_beachball
0.439s imaging/tests/test_mopad.py::TestMopad::test_mopad_collection
0.432s imaging/tests/test_spectrogram.py::TestSpectrogram::test_spectrogram

Warnings (11)

Stage Filename Category Message
runtest /workspace/testbed/obspy/io/nordic/ellipse.py:377 DeprecationWarning Arrays of 2-dimensional vectors are deprecated. Use arrays of 3-dimensional vectors instead. (deprecated in NumPy 2.0)
runtest /workspace/testbed/obspy/imaging/source.py:332 MatplotlibDeprecationWarning The get_cmap function was deprecated in Matplotlib 3.7 and will be removed in 3.11. Use ``matplotlib.colormaps[name]`` or ``matplotlib.colormaps.get_cmap()`` or ``pyplot.get_cmap()`` instead.
collect /workspace/testbed/obspy/imaging/cm.py:299 MatplotlibDeprecationWarning The get_cmap function was deprecated in Matplotlib 3.7 and will be removed in 3.11. Use ``matplotlib.colormaps[name]`` or ``matplotlib.colormaps.get_cmap()`` or ``pyplot.get_cmap()`` instead.
runtest /workspace/testbed/obspy/imaging/scripts/scan.py:395 UserWarning Attempting to set identical low and high ylims makes transformation singular; automatically expanding.
runtest /workspace/testbed/obspy/imaging/scripts/mopad.py:840 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /workspace/testbed/obspy/io/kml/core.py:65 MatplotlibDeprecationWarning The get_cmap function was deprecated in Matplotlib 3.7 and will be removed in 3.11. Use ``matplotlib.colormaps[name]`` or ``matplotlib.colormaps.get_cmap()`` or ``pyplot.get_cmap()`` instead.
collect /workspace/testbed/obspy/clients/filesystem/db.py:18 MovedIn20Warning The ``declarative_base()`` function is now available as sqlalchemy.orm.declarative_base(). (deprecated since: 2.0) (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9)
collect /workspace/testbed/obspy/imaging/cm.py:300 MatplotlibDeprecationWarning The get_cmap function was deprecated in Matplotlib 3.7 and will be removed in 3.11. Use ``matplotlib.colormaps[name]`` or ``matplotlib.colormaps.get_cmap()`` or ``pyplot.get_cmap()`` instead.
runtest /workspace/testbed/obspy/imaging/source.py:376 MatplotlibDeprecationWarning The get_cmap function was deprecated in Matplotlib 3.7 and will be removed in 3.11. Use ``matplotlib.colormaps[name]`` or ``matplotlib.colormaps.get_cmap()`` or ``pyplot.get_cmap()`` instead.
runtest /workspace/testbed/obspy/imaging/source.py:339 MatplotlibDeprecationWarning The get_cmap function was deprecated in Matplotlib 3.7 and will be removed in 3.11. Use ``matplotlib.colormaps[name]`` or ``matplotlib.colormaps.get_cmap()`` or ``pyplot.get_cmap()`` instead.
runtest /workspace/testbed/obspy/imaging/waveform.py:1292 MatplotlibDeprecationWarning The get_cmap function was deprecated in Matplotlib 3.7 and will be removed in 3.11. Use ``matplotlib.colormaps[name]`` or ``matplotlib.colormaps.get_cmap()`` or ``pyplot.get_cmap()`` instead.