#147492 Report by node c9a40ede5211 covering 1670 tests from 48 modules resulted into 83 errors
Report
- ObsPy version
- 1.2.0rc3.post0+7.g76111dfdae.…
- GitHub Pull Request
- -
- Report file
- XML document
- Total runtime
- 60.0 sec
- Report date/time
- Nov. 6, 2025, 7:40 a.m.
System / Python
- Architecture
- 64bit
- Machine
- x86_64
- Node
- c9a40ede5211
- Processor
- None
- Python Compiler
- GCC 12.2.0
- Python Implementation
- CPython
- Python Version
- 3.8.20
- Release
- 5.15.0-106-generic
- System
- Linux
- Version
- #116-Ubuntu SMP Wed Apr 17 09:17:56 UTC 2024
Dependencies
- cartopy
- ---
- decorator
- 5.2.1
- flake8
- ---
- future
- 1.0.0
- geographiclib
- ---
- lxml.etree
- 6.0.2
- m2crypto
- ---
- matplotlib
- 3.7.5
- mock
- ---
- mpl_toolkits.basemap
- ---
- numpy
- 1.24.4
- pep8-naming
- ---
- pyflakes
- ---
- pyimgur
- ---
- pyproj
- ---
- requests
- 2.32.4
- scipy
- 1.10.1
- setuptools
- 57.5.0
- shapefile
- ---
- sqlalchemy
- 2.0.44
Modules (48)
| Module | Errors / Failures | Tracebacks | ||||
|---|---|---|---|---|---|---|
| obspy.clients.arclink | Not tested | - | - | - | - | - |
| obspy.clients.earthworm | Not tested | - | - | - | - | - |
| obspy.clients.fdsn | Not tested | - | - | - | - | - |
| obspy.clients.filesystem | 9 | 28 | 28 | - | 1.31s | 1 2 3 4 5 6 7 8 9 |
| obspy.clients.iris | Not tested | - | - | - | - | - |
| obspy.clients.neic | Not tested | - | - | - | - | - |
| obspy.clients.nrl | Not tested | - | - | - | - | - |
| obspy.clients.seedlink | Not tested | - | - | - | - | - |
| obspy.clients.seishub | Not tested | - | - | - | - | - |
| obspy.clients.syngine | Not tested | - | - | - | - | - |
| obspy.core | 30 | 666 | 642 | 24 | 21.47s | 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 |
| obspy.db | 1 | 1 | 1 | - | 0.00s | 40 |
| obspy.geodetics | 1 | 20 | 18 | 2 | 0.08s | 41 |
| obspy.imaging | 1 | 1 | 1 | - | 0.00s | 42 |
| obspy.io.ah | 1 | 5 | 5 | - | 0.06s | 43 |
| obspy.io.arclink | - | 4 | 4 | - | 1.19s | - |
| obspy.io.ascii | - | 28 | 28 | - | 0.11s | - |
| obspy.io.cmtsolution | - | 10 | 10 | - | 0.04s | - |
| obspy.io.cnv | - | 1 | 1 | - | 0.01s | - |
| obspy.io.css | 1 | 1 | 1 | - | 0.00s | 44 |
| obspy.io.dmx | 4 | 5 | 5 | - | 0.02s | 45 46 47 48 |
| obspy.io.focmec | - | 8 | 8 | - | 0.06s | - |
| obspy.io.gcf | 6 | 9 | 9 | - | 0.03s | 49 50 51 52 53 54 |
| obspy.io.gse2 | - | 55 | 55 | - | 0.30s | - |
| obspy.io.iaspei | - | 7 | 7 | - | 0.56s | - |
| obspy.io.json | - | 4 | 4 | - | 0.02s | - |
| obspy.io.kinemetrics | 3 | 7 | 7 | - | 0.20s | 55 56 57 |
| obspy.io.kml | - | 3 | 3 | - | 0.09s | - |
| obspy.io.mseed | - | 127 | 127 | - | 1.18s | - |
| obspy.io.ndk | - | 20 | 20 | - | 0.21s | - |
| obspy.io.nied | 5 | 11 | 11 | - | 0.04s | 58 59 60 61 62 |
| obspy.io.nlloc | - | 12 | 11 | 1 | 0.08s | - |
| obspy.io.nordic | 2 | 50 | 50 | - | 0.61s | 63 64 |
| obspy.io.pdas | 1 | 3 | 3 | - | 0.01s | 65 |
| obspy.io.pde | - | 13 | 13 | - | 0.18s | - |
| obspy.io.quakeml | - | 38 | 38 | - | 0.38s | - |
| obspy.io.reftek | 3 | 20 | 20 | - | 0.11s | 66 67 68 |
| obspy.io.rg16 | 4 | 36 | 36 | - | 0.07s | 69 70 71 72 |
| obspy.io.sac | - | 95 | 95 | - | 0.29s | - |
| obspy.io.scardec | - | 5 | 5 | - | 0.05s | - |
| obspy.io.seg2 | - | 2 | 2 | - | 0.01s | - |
| obspy.io.segy | - | 56 | 56 | - | 0.28s | - |
| obspy.io.seisan | - | 8 | 8 | - | 0.06s | - |
| obspy.io.seiscomp | - | 46 | 46 | - | 0.99s | - |
| obspy.io.sh | - | 25 | 25 | - | 0.34s | - |
| obspy.io.shapefile | - | 7 | 1 | 6 | 0.04s | - |
| obspy.io.stationtxt | - | 11 | 11 | - | 0.05s | - |
| obspy.io.stationxml | - | 22 | 22 | - | 0.29s | - |
| obspy.io.wav | - | 8 | 8 | - | 0.02s | - |
| obspy.io.win | - | 2 | 2 | - | 0.08s | - |
| obspy.io.xseed | - | 82 | 82 | - | 5.16s | - |
| obspy.io.y | - | 5 | 5 | - | 0.01s | - |
| obspy.io.zmap | - | 14 | 14 | - | 0.12s | - |
| obspy.realtime | - | 22 | 22 | - | 0.23s | - |
| obspy.scripts | - | 2 | 2 | - | 0.01s | - |
| obspy.signal | 1 | 1 | 1 | - | 0.00s | 73 |
| obspy.taup | 10 | 64 | 58 | 6 | 23.61s | 74 75 76 77 78 79 80 81 82 83 |
| Summary | 83 | 1670 | 1631 | 39 | 60.04s | 83 |
Tracebacks (83)
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1462, in _fetch_index_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1463, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8513e8550; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8850; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e84c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e83a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8cd0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e89a0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8513e8550; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8850; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e84c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e83a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8cd0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e89a0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 385, in test_get_availability actual_avail = client.get_availability( File "/testbed/obspy/clients/filesystem/tsindex.py", line 424, in get_availability tsindex_rows = self._get_tsindex_rows(network, station, File "/testbed/obspy/clients/filesystem/tsindex.py", line 688, in _get_tsindex_rows return self.request_handler._fetch_index_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1584, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8513e8550; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8850; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e84c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e83a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8cd0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e89a0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8513e8550; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8850; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e84c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e83a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8cd0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e89a0; endtime>)?
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1642, in _fetch_summary_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1643, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85142c400; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e20; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8c40; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8d90; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8100; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85142c400; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e20; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8c40; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8d90; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8100; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e50; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 240, in test_get_availability_extent actual_avail_extents = client.get_availability_extent( File "/testbed/obspy/clients/filesystem/tsindex.py", line 367, in get_availability_extent summary_rows = self._get_summary_rows(network, station, File "/testbed/obspy/clients/filesystem/tsindex.py", line 606, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1660, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85142c400; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e20; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8c40; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8d90; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8100; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85142c400; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e20; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8c40; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8d90; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8100; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e8e50; endtime>)?
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1642, in _fetch_summary_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1643, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8513e31c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e34f0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3910; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3610; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3670; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e30d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8513e31c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e34f0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3910; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3610; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3670; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e30d0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 179, in test_get_nslc actual_nslc = client.get_nslc("I*,CU", File "/testbed/obspy/clients/filesystem/tsindex.py", line 326, in get_nslc summary_rows = self._get_summary_rows(network, station, location, File "/testbed/obspy/clients/filesystem/tsindex.py", line 606, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1660, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8513e31c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e34f0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3910; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3610; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3670; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e30d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8513e31c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e34f0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3910; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3610; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3670; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513e30d0; endtime>)?
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1462, in _fetch_index_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1463, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85145e490; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3fa0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3bb0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c37c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3400; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3520; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85145e490; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3fa0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3bb0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c37c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3400; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3520; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 66, in test_get_waveforms returned_stream = client.get_waveforms( File "/testbed/obspy/clients/filesystem/tsindex.py", line 271, in get_waveforms return self._get_waveforms(query_rows, merge) File "/testbed/obspy/clients/filesystem/tsindex.py", line 632, in _get_waveforms index_rows = self.request_handler._fetch_index_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1584, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85145e490; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3fa0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3bb0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c37c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3400; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3520; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85145e490; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513e3fa0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3bb0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c37c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3400; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3520; endtime>)?
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1462, in _fetch_index_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1463, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8514001c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8514003d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff851400d90; location>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8430; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8790; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385c40; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8514001c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8514003d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff851400d90; location>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8430; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8790; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385c40; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 146, in test_get_waveforms_bulk returned_stream = client.get_waveforms_bulk(bulk_request) File "/testbed/obspy/clients/filesystem/tsindex.py", line 297, in get_waveforms_bulk return self._get_waveforms(query_rows, merge) File "/testbed/obspy/clients/filesystem/tsindex.py", line 632, in _get_waveforms index_rows = self.request_handler._fetch_index_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1584, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8514001c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8514003d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff851400d90; location>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8430; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8790; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385c40; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8514001c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff8514003d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff851400d90; location>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8430; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514e8790; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385c40; endtime>)?
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1462, in _fetch_index_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1463, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff851385220; network>, <sqlalchemy.sql.elements.Label at 0x7ff851385f70; station>, <sqlalchemy.sql.elements.Label at 0x7ff851385f40; location>, <sqlalchemy.sql.elements.Label at 0x7ff851385eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff851385880; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385970; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff851385220; network>, <sqlalchemy.sql.elements.Label at 0x7ff851385f70; station>, <sqlalchemy.sql.elements.Label at 0x7ff851385f40; location>, <sqlalchemy.sql.elements.Label at 0x7ff851385eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff851385880; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385970; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 585, in test_has_data self.assertTrue(client.has_data()) File "/testbed/obspy/clients/filesystem/tsindex.py", line 567, in has_data avail_percentage = self.get_availability_percentage(network, File "/testbed/obspy/clients/filesystem/tsindex.py", line 503, in get_availability_percentage avail = self.get_availability(network, station, File "/testbed/obspy/clients/filesystem/tsindex.py", line 424, in get_availability tsindex_rows = self._get_tsindex_rows(network, station, File "/testbed/obspy/clients/filesystem/tsindex.py", line 688, in _get_tsindex_rows return self.request_handler._fetch_index_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1584, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff851385220; network>, <sqlalchemy.sql.elements.Label at 0x7ff851385f70; station>, <sqlalchemy.sql.elements.Label at 0x7ff851385f40; location>, <sqlalchemy.sql.elements.Label at 0x7ff851385eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff851385880; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385970; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff851385220; network>, <sqlalchemy.sql.elements.Label at 0x7ff851385f70; station>, <sqlalchemy.sql.elements.Label at 0x7ff851385f40; location>, <sqlalchemy.sql.elements.Label at 0x7ff851385eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff851385880; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff851385970; endtime>)?
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1462, in _fetch_index_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1463, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85142ae20; network>, <sqlalchemy.sql.elements.Label at 0x7ff85142a6d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85142a700; location>, <sqlalchemy.sql.elements.Label at 0x7ff85142a7c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514954c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8514e5bb0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85142ae20; network>, <sqlalchemy.sql.elements.Label at 0x7ff85142a6d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85142a700; location>, <sqlalchemy.sql.elements.Label at 0x7ff85142a7c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514954c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8514e5bb0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 784, in test_build_file_list self.assertRaisesRegex(OSError, File "/usr/local/lib/python3.8/unittest/case.py", line 1357, in assertRaisesRegex return context.handle('assertRaisesRegex', args, kwargs) File "/usr/local/lib/python3.8/unittest/case.py", line 202, in handle callable_obj(*args, **kwargs) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1072, in build_file_list tsindex = self.request_handler._fetch_index_rows() File "/testbed/obspy/clients/filesystem/tsindex.py", line 1584, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85142ae20; network>, <sqlalchemy.sql.elements.Label at 0x7ff85142a6d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85142a700; location>, <sqlalchemy.sql.elements.Label at 0x7ff85142a7c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514954c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8514e5bb0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85142ae20; network>, <sqlalchemy.sql.elements.Label at 0x7ff85142a6d0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85142a700; location>, <sqlalchemy.sql.elements.Label at 0x7ff85142a7c0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8514954c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8514e5bb0; endtime>)?
Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1642, in _fetch_summary_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1643, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8513c3520; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513c35b0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3fa0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3340; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3e50; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3df0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8513c3520; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513c35b0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3fa0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3340; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3e50; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3df0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tests/test_tsindex.py", line 936, in test__fetch_summary_rows ts_summary_data = request_handler._fetch_summary_rows( File "/testbed/obspy/clients/filesystem/tsindex.py", line 1660, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff8513c3520; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513c35b0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3fa0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3340; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3e50; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3df0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff8513c3520; network>, <sqlalchemy.sql.elements.Label at 0x7ff8513c35b0; station>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3fa0; location>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3340; channel>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3e50; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff8513c3df0; endtime>)?
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.clients.filesystem.tsindex File "/testbed/obspy/clients/filesystem/tsindex.py", line 1, in tsindex ---------------------------------------------------------------------- File "/testbed/obspy/clients/filesystem/tsindex.py", line 64, in obspy.clients.filesystem.tsindex Failed example: extents = client.get_availability_extent(network="IU", channel="BHZ") Exception raised: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1642, in _fetch_summary_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1643, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85179c340; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c430; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179cb20; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179cdc0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ceb0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85179c340; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c430; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179cb20; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179cdc0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ceb0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.clients.filesystem.tsindex[6]>", line 1, in <module> extents = client.get_availability_extent(network="IU", channel="BHZ") File "/testbed/obspy/clients/filesystem/tsindex.py", line 367, in get_availability_extent summary_rows = self._get_summary_rows(network, station, File "/testbed/obspy/clients/filesystem/tsindex.py", line 606, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1660, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85179c340; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c430; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179cb20; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179cdc0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ceb0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85179c340; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c430; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179cb20; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179cdc0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ceb0; endtime>)? ---------------------------------------------------------------------- File "/testbed/obspy/clients/filesystem/tsindex.py", line 65, in obspy.clients.filesystem.tsindex Failed example: for extent in extents: print("{0:<3} {1:<6} {2:<3} {3:<4} {4} {5}".format(*extent)) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.clients.filesystem.tsindex[7]>", line 1, in <module> for extent in extents: NameError: name 'extents' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/clients/filesystem/tsindex.py", line 81, in obspy.clients.filesystem.tsindex Failed example: avail_percentage = client.get_availability_percentage( "IU", "ANMO", "10", "BHZ", UTCDateTime(2018, 1, 1, 0, 0, 0, 19500), UTCDateTime(2018, 1, 1, 0, 1, 57, 994536)) Exception raised: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1462, in _fetch_index_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1463, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c760; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ce80; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c760; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ce80; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.clients.filesystem.tsindex[9]>", line 1, in <module> avail_percentage = client.get_availability_percentage( File "/testbed/obspy/clients/filesystem/tsindex.py", line 503, in get_availability_percentage avail = self.get_availability(network, station, File "/testbed/obspy/clients/filesystem/tsindex.py", line 424, in get_availability tsindex_rows = self._get_tsindex_rows(network, station, File "/testbed/obspy/clients/filesystem/tsindex.py", line 688, in _get_tsindex_rows return self.request_handler._fetch_index_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1584, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c760; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ce80; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c760; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179ce80; endtime>)? ---------------------------------------------------------------------- File "/testbed/obspy/clients/filesystem/tsindex.py", line 85, in obspy.clients.filesystem.tsindex Failed example: print(avail_percentage) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.clients.filesystem.tsindex[10]>", line 1, in <module> print(avail_percentage) NameError: name 'avail_percentage' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/clients/filesystem/tsindex.py", line 99, in obspy.clients.filesystem.tsindex Failed example: st = client.get_waveforms("IU", "*", "*", "BHZ", t, t + 1) Exception raised: Traceback (most recent call last): File "/testbed/obspy/clients/filesystem/tsindex.py", line 1462, in _fetch_index_rows stmts = [ File "/testbed/obspy/clients/filesystem/tsindex.py", line 1463, in <listcomp> sa.select([ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 537, in select return Select(*entities) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5390, in __init__ self._raw_columns = [ File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 5391, in <listcomp> coercions.expect( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 395, in expect resolved = impl._literal_coercion( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 634, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 1132, in _raise_for_expected return super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 695, in _raise_for_expected super()._raise_for_expected( File "/usr/local/lib/python3.8/site-packages/sqlalchemy/sql/coercions.py", line 518, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c370; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c370; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.clients.filesystem.tsindex[12]>", line 1, in <module> st = client.get_waveforms("IU", "*", "*", "BHZ", t, t + 1) File "/testbed/obspy/clients/filesystem/tsindex.py", line 271, in get_waveforms return self._get_waveforms(query_rows, merge) File "/testbed/obspy/clients/filesystem/tsindex.py", line 632, in _get_waveforms index_rows = self.request_handler._fetch_index_rows(query_rows) File "/testbed/obspy/clients/filesystem/tsindex.py", line 1584, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c370; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7ff85179c3d0; network>, <sqlalchemy.sql.elements.Label at 0x7ff85179c370; station>, <sqlalchemy.sql.elements.Label at 0x7ff85179c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7ff85179c3a0; channel>, <sqlalchemy.sql.elements.Label at 0x7ff85179ca30; starttime>, <sqlalchemy.sql.elements.Label at 0x7ff85179c7c0; endtime>)?
Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 2585, in test_dtype_is_not_unnecessarily_changed self.assertEqual(tr_int32.copy().resample(2.0).data.dtype, np.float64) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type.
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 1900, in test_interpolate int_tr = org_tr.copy().interpolate(sampling_rate=1.0 / 0.003, File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 234, in raise_if_masked return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 2473, in interpolate self.data = np.atleast_1d(func( File "/testbed/obspy/signal/interpolation.py", line 157, in weighted_average_slopes sign_change = np.diff(np.sign(m)).astype(np.bool) File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'bool'. `np.bool` was a deprecated alias for the builtin `bool`. To avoid this error in existing code, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 2040, in test_interpolation_arguments interp_tr = tr.copy().interpolate(sampling_rate=0.3, File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 234, in raise_if_masked return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 2473, in interpolate self.data = np.atleast_1d(func( File "/testbed/obspy/signal/interpolation.py", line 157, in weighted_average_slopes sign_change = np.diff(np.sign(m)).astype(np.bool) File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'bool'. `np.bool` was a deprecated alias for the builtin `bool`. To avoid this error in existing code, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 1647, in test_method_chaining temp_tr = tr.trim(tr.stats.starttime + 1)\ File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type.
Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 1824, in test_processing_information tr.resample(tr.stats.sampling_rate / 2.0) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type.
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 2301, in test_remove_response_plot with ImageComparison(image_dir, "trace_remove_response.png", File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 1620, in test_resample tr_2 = tr.copy().resample(sampling_rate=50.0) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type.
Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 2100, in test_resample_new tr.resample(0.5, window='hanning', no_filter=True) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type.
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_network.py", line 143, in test_response_plot with ImageComparison(self.image_dir, "network_response.png", File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_util_base.py", line 80, in test_image_comparison with ImageComparison(path, img_basename) as ic: File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_station.py", line 53, in test_response_plot with ImageComparison(self.image_dir, "station_response.png", File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_station.py", line 71, in test_response_plot_degrees with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_waveform_plugins.py", line 232, in test_is_format is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_waveform_plugins.py", line 52, in test_raise_on_empty_file is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_waveform_plugins.py", line 431, in test_raise_on_unknown_format self.assertRaises(TypeError, read, tmpfile) File "/usr/local/lib/python3.8/unittest/case.py", line 816, in assertRaises return context.handle('assertRaises', args, kwargs) File "/usr/local/lib/python3.8/unittest/case.py", line 202, in handle callable_obj(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_waveform_plugins.py", line 100, in test_read_and_write st = read(outfile) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_channel.py", line 58, in test_response_plot with ImageComparison(self.image_dir, "channel_response.png", File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_response.py", line 142, in test_response_plot with ImageComparison(self.image_dir, "response_response.png", File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_response.py", line 161, in test_response_plot_degrees with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/testbed/obspy/core/tests/test_stream.py", line 2239, in test_method_chaining temp = st.trim(st[0].stats.starttime + 1, st[0].stats.starttime + 10)\ File "/testbed/obspy/core/stream.py", line 2335, in resample tr.resample(sampling_rate, window=native_str(window), File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type.
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_inventory.py", line 198, in test_response_plot with ImageComparison(self.image_dir, "inventory_response.png", File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_utcdatetime.py", line 1063, in test_floating_point_second_initialization for microns in np.arange(0, 5999, dtype=np.int): File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.trace.Trace.interpolate File "/testbed/obspy/core/trace.py", line 237, in interpolate ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 328, in obspy.core.trace.Trace.interpolate Failed example: tr.interpolate(sampling_rate=111.1) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.core.trace.Trace.interpolate[3]>", line 1, in <module> tr.interpolate(sampling_rate=111.1) # doctest: +ELLIPSIS File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 234, in raise_if_masked return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 2473, in interpolate self.data = np.atleast_1d(func( File "/testbed/obspy/signal/interpolation.py", line 157, in weighted_average_slopes sign_change = np.diff(np.sign(m)).astype(np.bool) File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'bool'. `np.bool` was a deprecated alias for the builtin `bool`. To avoid this error in existing code, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 330, in obspy.core.trace.Trace.interpolate Failed example: print(tr) # doctest: +ELLIPSIS Expected: BW.RJOB..EHZ | 2009-08-24T00:20:03... - ... | 111.1 Hz, 3332 samples Got: BW.RJOB..EHZ | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 340, in obspy.core.trace.Trace.interpolate Failed example: tr.interpolate(sampling_rate=111.1, starttime=tr.stats.starttime + 10) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.core.trace.Trace.interpolate[7]>", line 1, in <module> tr.interpolate(sampling_rate=111.1, File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 234, in raise_if_masked return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 2473, in interpolate self.data = np.atleast_1d(func( File "/testbed/obspy/signal/interpolation.py", line 157, in weighted_average_slopes sign_change = np.diff(np.sign(m)).astype(np.bool) File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'bool'. `np.bool` was a deprecated alias for the builtin `bool`. To avoid this error in existing code, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 343, in obspy.core.trace.Trace.interpolate Failed example: print(tr) # doctest: +ELLIPSIS Expected: BW.RJOB..EHZ | 2009-08-24T00:20:13... - ... | 111.1 Hz, 2221 samples Got: BW.RJOB..EHZ | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.trace.Trace.resample File "/testbed/obspy/core/trace.py", line 237, in resample ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 283, in obspy.core.trace.Trace.resample Failed example: tr.resample(4.0) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.core.trace.Trace.resample[3]>", line 1, in <module> tr.resample(4.0) # doctest: +ELLIPSIS File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type. ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 285, in obspy.core.trace.Trace.resample Failed example: len(tr) Expected: 32 Got: 8 ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 287, in obspy.core.trace.Trace.resample Failed example: tr.stats.sampling_rate Expected: 4.0 Got: 1.0 ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 289, in obspy.core.trace.Trace.resample Failed example: tr.data # doctest: +NORMALIZE_WHITESPACE +ELLIPSIS Expected: array([ 0.5 , 0.40432914, 0.3232233 , 0.26903012, 0.25 ... Got: array([ 0.5, 0. , 0.5, 1. , 0.5, 0. , 0.5, 1. ])
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.trace.Trace.times File "/testbed/obspy/core/trace.py", line 2487, in times ---------------------------------------------------------------------- File "/testbed/obspy/core/trace.py", line 2529, in obspy.core.trace.Trace.times Failed example: tr.times("matplotlib") Expected: array([ 733643.01392361, 733643.01392373, 733643.01392384, ..., 733643.01427049, 733643.0142706 , 733643.01427072]) Got: array([ 14480.01392361, 14480.01392373, 14480.01392384, ..., 14480.01427049, 14480.0142706 , 14480.01427072])
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.utcdatetime.UTCDateTime.matplotlib_date File "/testbed/obspy/core/utcdatetime.py", line unknown line number, in matplotlib_date ---------------------------------------------------------------------- File "/testbed/obspy/core/utcdatetime.py", line ?, in obspy.core.utcdatetime.UTCDateTime.matplotlib_date Failed example: t.matplotlib_date Expected: 733643.0139780092 Got: 14480.01397800926
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.stream.Stream.interpolate File "/testbed/obspy/core/stream.py", line 2520, in interpolate ---------------------------------------------------------------------- File "/testbed/obspy/core/stream.py", line 2551, in obspy.core.stream.Stream.interpolate Failed example: st.interpolate(sampling_rate=111.1) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.core.stream.Stream.interpolate[3]>", line 1, in <module> st.interpolate(sampling_rate=111.1) # doctest: +ELLIPSIS File "/testbed/obspy/core/stream.py", line 2560, in interpolate tr.interpolate(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 234, in raise_if_masked return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 2473, in interpolate self.data = np.atleast_1d(func( File "/testbed/obspy/signal/interpolation.py", line 157, in weighted_average_slopes sign_change = np.diff(np.sign(m)).astype(np.bool) File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'bool'. `np.bool` was a deprecated alias for the builtin `bool`. To avoid this error in existing code, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/core/stream.py", line 2553, in obspy.core.stream.Stream.interpolate Failed example: print(st) # doctest: +ELLIPSIS Expected: 3 Trace(s) in Stream: BW.RJOB..EHZ | 2009-08-24T00:20:03... - ... | 111.1 Hz, 3332 samples BW.RJOB..EHN | 2009-08-24T00:20:03... - ... | 111.1 Hz, 3332 samples BW.RJOB..EHE | 2009-08-24T00:20:03... - ... | 111.1 Hz, 3332 samples Got: 3 Trace(s) in Stream: BW.RJOB..EHZ | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples BW.RJOB..EHN | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples BW.RJOB..EHE | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.stream.Stream.resample File "/testbed/obspy/core/stream.py", line 2280, in resample ---------------------------------------------------------------------- File "/testbed/obspy/core/stream.py", line 2326, in obspy.core.stream.Stream.resample Failed example: st.resample(10.0) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2344, in get_window beta = float(window) ValueError: could not convert string to float: 'hanning' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2362, in get_window winfunc = _win_equiv[winstr] KeyError: 'hanning' The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.core.stream.Stream.resample[2]>", line 1, in <module> st.resample(10.0) # doctest: +ELLIPSIS File "/testbed/obspy/core/stream.py", line 2335, in resample tr.resample(sampling_rate, window=native_str(window), File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 245, in skip_if_no_data return func(*args, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/trace.py", line 273, in _add_processing_info result = func(*args, **kwargs) File "/testbed/obspy/core/trace.py", line 1733, in resample large_w = np.fft.ifftshift(get_window(native_str(window), File "/usr/local/lib/python3.8/site-packages/scipy/signal/windows/_windows.py", line 2364, in get_window raise ValueError("Unknown window type.") from e ValueError: Unknown window type. ---------------------------------------------------------------------- File "/testbed/obspy/core/stream.py", line 2328, in obspy.core.stream.Stream.resample Failed example: print(st) # doctest: +ELLIPSIS Expected: 3 Trace(s) in Stream: BW.RJOB..EHZ | 2009-08-24T00:20:03.000000Z ... | 10.0 Hz, 300 samples BW.RJOB..EHN | 2009-08-24T00:20:03.000000Z ... | 10.0 Hz, 300 samples BW.RJOB..EHE | 2009-08-24T00:20:03.000000Z ... | 10.0 Hz, 300 samples Got: 3 Trace(s) in Stream: BW.RJOB..EHZ | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples BW.RJOB..EHN | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples BW.RJOB..EHE | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_trace.py", line 1448, in test_times np.testing.assert_allclose(got[:5], expected, rtol=1e-17) File "/usr/local/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 1592, in assert_allclose assert_array_compare(compare, actual, desired, err_msg=str(err_msg), File "/usr/local/lib/python3.8/contextlib.py", line 75, in inner return func(*args, **kwds) File "/usr/local/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 862, in assert_array_compare raise AssertionError(msg) AssertionError: Not equal to tolerance rtol=1e-17, atol=0 Mismatched elements: 5 / 5 (100%) Max absolute difference: 719163.0 Max relative difference: 0.9849928778830878 x: array([ 10957. , 10957.000001, 10957.000001, 10957.000002, 10957.000002]) y: array([ 730120. , 730120.000001, 730120.000001, 730120.000002, 730120.000002])
Traceback (most recent call last): File "/testbed/obspy/core/tests/test_utcdatetime.py", line 1092, in test_matplotlib_date np.testing.assert_almost_equal( File "/usr/local/lib/python3.8/contextlib.py", line 75, in inner return func(*args, **kwds) File "/usr/local/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 604, in assert_almost_equal raise AssertionError(_build_err_msg()) AssertionError: Arrays are not almost equal to 8 decimals ACTUAL: 5965.5723676839116 DESIRED: 725128.5723676839
>>> Cannot import test suite for module obspy.db due to: -------------------------------------------------------- File "/usr/local/lib/python3.8/runpy.py", line 194, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/local/lib/python3.8/runpy.py", line 87, in _run_code exec(code, run_globals) File "/testbed/obspy/scripts/runtests.py", line 757, in <module> errors = run(interactive=False) File "/testbed/obspy/scripts/runtests.py", line 711, in run return run_tests(verbosity, args.tests, report, args.log, args.server, File "/testbed/obspy/scripts/runtests.py", line 542, in run_tests suites, status, import_failures = _get_suites(verbosity, tests) File "/testbed/obspy/scripts/runtests.py", line 164, in _get_suites suite.append(ut.loadTestsFromName(test, None)) File "/usr/local/lib/python3.8/unittest/loader.py", line 205, in loadTestsFromName test = obj() File "/testbed/obspy/db/tests/__init__.py", line 16, in suite add_unittests(suite, MODULE_NAME) File "/testbed/obspy/core/util/testing.py", line 70, in add_unittests _module = __import__(_module_name, File "/testbed/obspy/db/tests/test_client.py", line 14, in <module> from obspy.db.client import Client File "/testbed/obspy/db/client.py", line 24, in <module> from obspy.db.db import Base, WaveformChannel, WaveformFile, WaveformPath File "/testbed/obspy/db/db.py", line 20, in <module> from sqlalchemy.orm import relation ImportError: cannot import name 'relation' from 'sqlalchemy.orm' (/usr/local/lib/python3.8/site-packages/sqlalchemy/orm/__init__.py)
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.geodetics.base.locations2degrees File "/testbed/obspy/geodetics/base.py", line 333, in locations2degrees ---------------------------------------------------------------------- File "/testbed/obspy/geodetics/base.py", line 357, in obspy.geodetics.base.locations2degrees Failed example: locations2degrees(5, 5, 10, 10) Expected: 7.0397014191753815 Got: 7.0397014191753851
>>> Cannot import test suite for module obspy.imaging due to: ------------------------------------------------------------- File "/usr/local/lib/python3.8/runpy.py", line 194, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/local/lib/python3.8/runpy.py", line 87, in _run_code exec(code, run_globals) File "/testbed/obspy/scripts/runtests.py", line 757, in <module> errors = run(interactive=False) File "/testbed/obspy/scripts/runtests.py", line 711, in run return run_tests(verbosity, args.tests, report, args.log, args.server, File "/testbed/obspy/scripts/runtests.py", line 542, in run_tests suites, status, import_failures = _get_suites(verbosity, tests) File "/testbed/obspy/scripts/runtests.py", line 164, in _get_suites suite.append(ut.loadTestsFromName(test, None)) File "/usr/local/lib/python3.8/unittest/loader.py", line 205, in loadTestsFromName test = obj() File "/testbed/obspy/imaging/tests/__init__.py", line 24, in suite add_unittests(suite, MODULE_NAME) File "/testbed/obspy/core/util/testing.py", line 70, in add_unittests _module = __import__(_module_name, File "/testbed/obspy/imaging/tests/test_ppsd.py", line 16, in <module> from obspy.signal.tests.test_spectral_estimation import _get_ppsd File "/testbed/obspy/signal/tests/test_spectral_estimation.py", line 94, in <module> _ppsd = _internal_get_ppsd() File "/testbed/obspy/signal/tests/test_spectral_estimation.py", line 90, in _internal_get_ppsd ppsd.calculate_histogram() File "/testbed/obspy/signal/spectral_estimation.py", line 1179, in calculate_histogram selected = self._stack_selection( File "/testbed/obspy/signal/spectral_estimation.py", line 1042, in _stack_selection selected = np.ones(len(times_all), dtype=np.bool) File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'bool'. `np.bool` was a deprecated alias for the builtin `bool`. To avoid this error in existing code, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/ah/tests/test_core.py", line 67, in test_read st = read(testfile) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
>>> Cannot import test suite for module obspy.io.css due to: ------------------------------------------------------------ File "/usr/local/lib/python3.8/runpy.py", line 194, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/local/lib/python3.8/runpy.py", line 87, in _run_code exec(code, run_globals) File "/testbed/obspy/scripts/runtests.py", line 757, in <module> errors = run(interactive=False) File "/testbed/obspy/scripts/runtests.py", line 711, in run return run_tests(verbosity, args.tests, report, args.log, args.server, File "/testbed/obspy/scripts/runtests.py", line 542, in run_tests suites, status, import_failures = _get_suites(verbosity, tests) File "/testbed/obspy/scripts/runtests.py", line 164, in _get_suites suite.append(ut.loadTestsFromName(test, None)) File "/usr/local/lib/python3.8/unittest/loader.py", line 205, in loadTestsFromName test = obj() File "/testbed/obspy/io/css/tests/__init__.py", line 16, in suite add_doctests(suite, MODULE_NAME) File "/testbed/obspy/core/util/testing.py", line 119, in add_doctests _module = __import__(_module_name, File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/dmx/tests/test_core.py", line 86, in test_check_data_content_sum st = read(filename) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/dmx/tests/test_core.py", line 34, in test_read_via_obspy st = read(filename) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/dmx/tests/test_core.py", line 72, in test_read_with_station st = read(filename, station='EMPL') File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.io.dmx.__init__ File "/testbed/obspy/io/dmx/__init__.py", line 0, in __init__ ---------------------------------------------------------------------- File "/testbed/obspy/io/dmx/__init__.py", line 28, in obspy.io.dmx.__init__ Failed example: st = read("/path/to/131114_090600.dmx") Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.dmx.__init__[1]>", line 1, in <module> st = read("/path/to/131114_090600.dmx") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/dmx/__init__.py", line 29, in obspy.io.dmx.__init__ Failed example: print(st) #doctest: +NORMALIZE_WHITESPACE Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.dmx.__init__[2]>", line 1, in <module> print(st) #doctest: +NORMALIZE_WHITESPACE NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/dmx/__init__.py", line 43, in obspy.io.dmx.__init__ Failed example: st = read("/path/to/131114_090600.dmx", station="EMFO") Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.dmx.__init__[5]>", line 1, in <module> st = read("/path/to/131114_090600.dmx", station="EMFO") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/dmx/__init__.py", line 44, in obspy.io.dmx.__init__ Failed example: print(st) # doctest: +ELLIPSIS Expected: 1 Trace(s) in Stream: ETNA.EMFO..Z | 2013-11-14T09:06:00.000000Z - 2013-11-14T09:06:59.990000Z | 100.0 Hz, 6000 samples Got: 2 Trace(s) in Stream: ETNA.EMFO..Z | 2013-11-14T09:06:00.000000Z - 2013-11-14T09:06:59.990000Z | 100.0 Hz, 6000 samples ETNA.EMPL..Z | 2013-11-14T09:06:00.000000Z - 2013-11-14T09:06:59.990000Z | 100.0 Hz, 6000 samples
Traceback (most recent call last): File "/testbed/obspy/io/gcf/tests/test_core.py", line 129, in test_merge_gcf_stream st1 = read(filename, headonly=True, channel_prefix="HN") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/gcf/tests/test_core.py", line 112, in test_read_channel_prefix_via_obspy st = read(filename, headonly=True, channel_prefix="HN") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/gcf/tests/test_core.py", line 59, in test_read_head_via_obspy st = read(filename, headonly=True) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/gcf/tests/test_core.py", line 40, in test_read_via_obspy st = read(filename) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/gcf/tests/test_core.py", line 154, in test_sps_d st = read(filename, headonly=True, channel_prefix="HN") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.io.gcf.__init__ File "/testbed/obspy/io/gcf/__init__.py", line 1, in __init__ ---------------------------------------------------------------------- File "/testbed/obspy/io/gcf/__init__.py", line 21, in obspy.io.gcf.__init__ Failed example: st = read("/path/to/20160603_1955n.gcf") Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.gcf.__init__[1]>", line 1, in <module> st = read("/path/to/20160603_1955n.gcf") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/kinemetrics/tests/test_core.py", line 82, in test_read_via_obspy st = read(filename) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/util/base.py", line 669, in _generic_reader generic = callback_func(pathname_or_url, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 150, in uncompress_file return func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 443, in _read_from_plugin is_format = is_format(filename) File "/testbed/obspy/io/gse2/core.py", line 124, in _is_gse1 with open(filename, 'rb') as f: TypeError: expected str, bytes or os.PathLike object, not _io.BytesIO During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/io/kinemetrics/tests/test_core.py", line 131, in test_reading_via_obspy_and_bytesio st = read(buf) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 676, in _generic_reader generic = callback_func(fh.name, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.io.kinemetrics.__init__ File "/testbed/obspy/io/kinemetrics/__init__.py", line 1, in __init__ ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 24, in obspy.io.kinemetrics.__init__ Failed example: st = read("/path/to/BI008_MEMA-04823.evt") Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[1]>", line 1, in <module> st = read("/path/to/BI008_MEMA-04823.evt") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 25, in obspy.io.kinemetrics.__init__ Failed example: st # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[2]>", line 1, in <module> st # doctest: +ELLIPSIS NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 27, in obspy.io.kinemetrics.__init__ Failed example: print (st) # doctest: +NORMALIZE_WHITESPACE Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[3]>", line 1, in <module> print (st) # doctest: +NORMALIZE_WHITESPACE NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 45, in obspy.io.kinemetrics.__init__ Failed example: stats_evt = st[0].stats.pop('kinemetrics_evt') Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[4]>", line 1, in <module> stats_evt = st[0].stats.pop('kinemetrics_evt') NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 46, in obspy.io.kinemetrics.__init__ Failed example: print(st[0].stats) # doctest: +NORMALIZE_WHITESPACE Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[5]>", line 1, in <module> print(st[0].stats) # doctest: +NORMALIZE_WHITESPACE NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 58, in obspy.io.kinemetrics.__init__ Failed example: for k, v in sorted(stats_evt.items()): print(k, v) # doctest: +ELLIPSIS, +NORMALIZE_WHITESPACE Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[6]>", line 1, in <module> for k, v in sorted(stats_evt.items()): NameError: name 'stats_evt' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 98, in obspy.io.kinemetrics.__init__ Failed example: type(st[0].data) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[7]>", line 1, in <module> type(st[0].data) # doctest: +ELLIPSIS NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/kinemetrics/__init__.py", line 100, in obspy.io.kinemetrics.__init__ Failed example: print(st[0].data) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.kinemetrics.__init__[8]>", line 1, in <module> print(st[0].data) NameError: name 'st' is not defined
Traceback (most recent call last): File "/testbed/obspy/io/nied/tests/test_knet_reading.py", line 26, in test_read_knet_ascii tr = read(testfile)[0] File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/util/base.py", line 669, in _generic_reader generic = callback_func(pathname_or_url, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 150, in uncompress_file return func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 443, in _read_from_plugin is_format = is_format(filename) File "/testbed/obspy/io/gse2/core.py", line 124, in _is_gse1 with open(filename, 'rb') as f: TypeError: expected str, bytes or os.PathLike object, not _io.BytesIO During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/io/nied/tests/test_knet_reading.py", line 60, in test_read_knet_ascii_from_bytes_io tr = read(buf)[0] File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 676, in _generic_reader generic = callback_func(fh.name, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/core/util/base.py", line 669, in _generic_reader generic = callback_func(pathname_or_url, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 150, in uncompress_file return func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 443, in _read_from_plugin is_format = is_format(filename) File "/testbed/obspy/io/gse2/core.py", line 124, in _is_gse1 with open(filename, 'rb') as f: TypeError: expected str, bytes or os.PathLike object, not _io.BufferedReader During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/testbed/obspy/io/nied/tests/test_knet_reading.py", line 41, in test_read_knet_ascii_from_open_files tr = read(fh)[0] File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 676, in _generic_reader generic = callback_func(fh.name, **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/nied/tests/test_knet_reading.py", line 76, in test_station_name_hack tr = read(testfile, convert_stnm=True)[0] File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.io.nied.__init__ File "/testbed/obspy/io/nied/__init__.py", line 0, in __init__ ---------------------------------------------------------------------- File "/testbed/obspy/io/nied/__init__.py", line 90, in obspy.io.nied.__init__ Failed example: st = read('/path/to/test.knet') Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.nied.__init__[5]>", line 1, in <module> st = read('/path/to/test.knet') File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/nied/__init__.py", line 91, in obspy.io.nied.__init__ Failed example: print(st) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.nied.__init__[6]>", line 1, in <module> print(st) # doctest: +ELLIPSIS NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/nied/__init__.py", line 101, in obspy.io.nied.__init__ Failed example: st = read('/path/to/test.knet',convert_stnm=True) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.nied.__init__[7]>", line 1, in <module> st = read('/path/to/test.knet',convert_stnm=True) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/nied/__init__.py", line 102, in obspy.io.nied.__init__ Failed example: print(st) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.nied.__init__[8]>", line 1, in <module> print(st) # doctest: +ELLIPSIS NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/nied/__init__.py", line 109, in obspy.io.nied.__init__ Failed example: print(st[0].stats) # doctest: +ELLIPSIS, +NORMALIZE_WHITESPACE Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.nied.__init__[9]>", line 1, in <module> print(st[0].stats) # doctest: +ELLIPSIS, +NORMALIZE_WHITESPACE NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/nied/__init__.py", line 123, in obspy.io.nied.__init__ Failed example: print(st[0].stats.knet.stlo) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.nied.__init__[10]>", line 1, in <module> print(st[0].stats.knet.stlo) NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/nied/__init__.py", line 126, in obspy.io.nied.__init__ Failed example: print(st[0].stats.knet.comment) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.nied.__init__[11]>", line 1, in <module> print(st[0].stats.knet.comment) NameError: name 'st' is not defined
Traceback (most recent call last): File "/testbed/obspy/io/nordic/tests/test_nordic.py", line 1000, in test_ellipse_plot with ImageComparison(self.testing_path, 'plot_ellipse.png', File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/io/nordic/tests/test_nordic.py", line 1017, in test_ellipse_plot_tangents with ImageComparison(self.testing_path, 'plot_ellipse_tangents.png', File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.io.pdas.core._read_pdas File "/testbed/obspy/io/pdas/core.py", line 45, in _read_pdas ---------------------------------------------------------------------- File "/testbed/obspy/io/pdas/core.py", line 61, in obspy.io.pdas.core._read_pdas Failed example: st = read("/path/to/p1246001.108") Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.pdas.core._read_pdas[1]>", line 1, in <module> st = read("/path/to/p1246001.108") File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/pdas/core.py", line 62, in obspy.io.pdas.core._read_pdas Failed example: st # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.pdas.core._read_pdas[2]>", line 1, in <module> st # doctest: +ELLIPSIS NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/pdas/core.py", line 64, in obspy.io.pdas.core._read_pdas Failed example: print(st) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.pdas.core._read_pdas[3]>", line 1, in <module> print(st) # doctest: +ELLIPSIS NameError: name 'st' is not defined
Traceback (most recent call last): File "/testbed/obspy/io/reftek/tests/test_core.py", line 216, in test_integration_with_obspy_core st_reftek = obspy.read( File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/reftek/tests/test_core.py", line 531, in test_reading_packet_with_vpu_float_string st = obspy.read(self.reftek_file_vpu, File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.io.reftek.__init__ File "/testbed/obspy/io/reftek/__init__.py", line 1, in __init__ ---------------------------------------------------------------------- File "/testbed/obspy/io/reftek/__init__.py", line 53, in obspy.io.reftek.__init__ Failed example: st = read("/path/to/225051000_00008656", network="BW", location="", component_codes="ZNE") Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.reftek.__init__[4]>", line 1, in <module> st = read("/path/to/225051000_00008656", network="BW", location="", File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/reftek/__init__.py", line 55, in obspy.io.reftek.__init__ Failed example: st # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.reftek.__init__[5]>", line 1, in <module> st # doctest: +ELLIPSIS NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/reftek/__init__.py", line 57, in obspy.io.reftek.__init__ Failed example: print(st) # doctest: +ELLIPSIS Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.reftek.__init__[6]>", line 1, in <module> print(st) # doctest: +ELLIPSIS NameError: name 'st' is not defined ---------------------------------------------------------------------- File "/testbed/obspy/io/reftek/__init__.py", line 71, in obspy.io.reftek.__init__ Failed example: print(st[0].stats) # doctest: +ELLIPSIS +NORMALIZE_WHITESPACE Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.reftek.__init__[7]>", line 1, in <module> print(st[0].stats) # doctest: +ELLIPSIS +NORMALIZE_WHITESPACE NameError: name 'st' is not defined
Traceback (most recent call last): File "/testbed/obspy/io/rg16/tests/test_read_rg16.py", line 126, in test_contacts_north_and_merge st = rc._read_rg16(filename, contacts_north=True, merge=True) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/io/rg16/util.py", line 28, in _open_file return func(*args, **kwargs) File "/testbed/obspy/io/rg16/core.py", line 81, in _read_rg16 traces = _quick_merge(traces) File "/testbed/obspy/io/rg16/util.py", line 141, in _quick_merge ar, trace_ar = _trace_list_to_rec_array(traces) File "/testbed/obspy/io/rg16/util.py", line 165, in _trace_list_to_rec_array dtype1 = [(nstr('id'), np.object), (nstr('starttime'), float), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'object'. `np.object` was a deprecated alias for the builtin `object`. To avoid this error in existing code, use `object` by itself. Doing this will not modify any behavior and is safe. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/rg16/tests/test_read_rg16.py", line 115, in test_merge st_merged = rc._read_rg16(fcnt_file, merge=True) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/io/rg16/util.py", line 28, in _open_file return func(*args, **kwargs) File "/testbed/obspy/io/rg16/core.py", line 81, in _read_rg16 traces = _quick_merge(traces) File "/testbed/obspy/io/rg16/util.py", line 141, in _quick_merge ar, trace_ar = _trace_list_to_rec_array(traces) File "/testbed/obspy/io/rg16/util.py", line 165, in _trace_list_to_rec_array dtype1 = [(nstr('id'), np.object), (nstr('starttime'), float), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'object'. `np.object` was a deprecated alias for the builtin `object`. To avoid this error in existing code, use `object` by itself. Doing this will not modify any behavior and is safe. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/io/rg16/tests/test_read_rg16.py", line 35, in test_reading_rg16_files st_1 = read(fcnt_file) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 2204, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.io.rg16.__init__ File "/testbed/obspy/io/rg16/__init__.py", line 0, in __init__ ---------------------------------------------------------------------- File "/testbed/obspy/io/rg16/__init__.py", line 53, in obspy.io.rg16.__init__ Failed example: st = obspy.read(filename) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.rg16.__init__[3]>", line 1, in <module> st = obspy.read(filename) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/rg16/__init__.py", line 59, in obspy.io.rg16.__init__ Failed example: st = obspy.read(filename, merge=True) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.rg16.__init__[5]>", line 1, in <module> st = obspy.read(filename, merge=True) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations ---------------------------------------------------------------------- File "/testbed/obspy/io/rg16/__init__.py", line 65, in obspy.io.rg16.__init__ Failed example: st = obspy.read(filename, contacts_north=True) Exception raised: Traceback (most recent call last): File "/usr/local/lib/python3.8/doctest.py", line 1336, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.io.rg16.__init__[6]>", line 1, in <module> st = obspy.read(filename, contacts_north=True) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 300, in _map_example_filename return func(*args, **kwargs) File "/testbed/obspy/core/stream.py", line 212, in read st = _generic_reader(pathname_or_url, _read, **kwargs) File "/testbed/obspy/core/util/base.py", line 701, in _generic_reader generic = callback_func(pathnames[0], **kwargs) File "/usr/local/lib/python3.8/site-packages/decorator.py", line 235, in fun return caller(func, *(extras + args), **kw) File "/testbed/obspy/core/util/decorator.py", line 210, in uncompress_file result = func(filename, *args, **kwargs) File "/testbed/obspy/core/stream.py", line 256, in _read stream, format = _read_from_plugin('waveform', filename, format=format, File "/testbed/obspy/core/util/base.py", line 431, in _read_from_plugin is_format = buffered_load_entry_point( File "/testbed/obspy/core/util/misc.py", line 651, in buffered_load_entry_point _ENTRY_POINT_CACHE[hash_str] = load_entry_point(dist, group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 474, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2846, in load_entry_point return ep.load() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2450, in load return self.resolve() File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2456, in resolve module = __import__(self.module_name, fromlist=['__name__'], level=0) File "/testbed/obspy/io/css/core.py", line 25, in <module> b'c0': (b'S12', np.int), File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'int'. `np.int` was a deprecated alias for the builtin `int`. To avoid this error in existing code, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
>>> Cannot import test suite for module obspy.signal due to: ------------------------------------------------------------ File "/usr/local/lib/python3.8/runpy.py", line 194, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/local/lib/python3.8/runpy.py", line 87, in _run_code exec(code, run_globals) File "/testbed/obspy/scripts/runtests.py", line 757, in <module> errors = run(interactive=False) File "/testbed/obspy/scripts/runtests.py", line 711, in run return run_tests(verbosity, args.tests, report, args.log, args.server, File "/testbed/obspy/scripts/runtests.py", line 542, in run_tests suites, status, import_failures = _get_suites(verbosity, tests) File "/testbed/obspy/scripts/runtests.py", line 164, in _get_suites suite.append(ut.loadTestsFromName(test, None)) File "/usr/local/lib/python3.8/unittest/loader.py", line 205, in loadTestsFromName test = obj() File "/testbed/obspy/signal/tests/__init__.py", line 17, in suite add_unittests(suite, MODULE_NAME) File "/testbed/obspy/core/util/testing.py", line 70, in add_unittests _module = __import__(_module_name, File "/testbed/obspy/signal/tests/test_spectral_estimation.py", line 94, in <module> _ppsd = _internal_get_ppsd() File "/testbed/obspy/signal/tests/test_spectral_estimation.py", line 90, in _internal_get_ppsd ppsd.calculate_histogram() File "/testbed/obspy/signal/spectral_estimation.py", line 1179, in calculate_histogram selected = self._stack_selection( File "/testbed/obspy/signal/spectral_estimation.py", line 1042, in _stack_selection selected = np.ones(len(times_all), dtype=np.bool) File "/usr/local/lib/python3.8/site-packages/numpy/__init__.py", line 305, in __getattr__ raise AttributeError(__former_attrs__[attr]) AttributeError: module 'numpy' has no attribute 'bool'. `np.bool` was a deprecated alias for the builtin `bool`. To avoid this error in existing code, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 102, in test_cartesian_many_phases with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 114, in test_cartesian_many_phases_buried_station with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 128, in test_cartesian_many_phases_one_way with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 159, in test_plot_travel_times with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 171, in test_plot_travel_times_convenience with ImageComparison( File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 85, in test_spherical_diff_phases with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 36, in test_spherical_many_phases with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 49, in test_spherical_many_phases_buried_station with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 62, in test_spherical_many_phases_one_way with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Traceback (most recent call last): File "/testbed/obspy/taup/tests/test_plotting.py", line 74, in test_spherical_more_then_360_degrees with ImageComparison(self.image_dir, File "/testbed/obspy/core/util/testing.py", line 418, in __enter__ rcParams['text.hinting'] = False File "/usr/local/lib/python3.8/site-packages/matplotlib/__init__.py", line 722, in __setitem__ raise ValueError(f"Key {key}: {ve}") from None ValueError: Key text.hinting: False is not a valid value for text.hinting; supported values are ['default', 'no_autohint', 'force_autohint', 'no_hinting', 'auto', 'native', 'either', 'none']
Skipped tests (39)
| Submodule | Test | Skip message |
|---|---|---|
| core | test_location_plot_global (obspy.core.tests.test_network.NetworkBasemapTestCase) | basemap not installed |
| core | test_location_plot_local (obspy.core.tests.test_network.NetworkBasemapTestCase) | basemap not installed |
| core | test_location_plot_ortho (obspy.core.tests.test_network.NetworkBasemapTestCase) | basemap not installed |
| core | test_location_plot_global (obspy.core.tests.test_network.NetworkCartopyTestCase) | cartopy not installed |
| core | test_location_plot_local (obspy.core.tests.test_network.NetworkCartopyTestCase) | cartopy not installed |
| core | test_location_plot_ortho (obspy.core.tests.test_network.NetworkCartopyTestCase) | cartopy not installed |
| core | test_flake8 (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) | Formatting tests require at least flake8 3.0. |
| core | test_catalog_plot_global (obspy.core.tests.test_event.CatalogBasemapTestCase) | basemap not installed |
| core | test_catalog_plot_local (obspy.core.tests.test_event.CatalogBasemapTestCase) | basemap not installed |
| core | test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogBasemapTestCase) | basemap not installed |
| core | test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogBasemapTestCase) | basemap not installed |
| core | test_plot_catalog_before_1900 (obspy.core.tests.test_event.CatalogBasemapTestCase) | basemap not installed |
| core | test_catalog_plot_global (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
| core | test_catalog_plot_local (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
| core | test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
| core | test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
| core | test_plot_farfield_without_quiver_with_maps (obspy.core.tests.test_event.EventTestCase) | basemap not installed |
| core | test_combined_station_event_plot (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | basemap not installed |
| core | test_location_plot_global (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | basemap not installed |
| core | test_location_plot_local (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | basemap not installed |
| core | test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | basemap not installed |
| core | test_location_plot_global (obspy.core.tests.test_inventory.InventoryCartopyTestCase) | cartopy not installed |
| core | test_location_plot_local (obspy.core.tests.test_inventory.InventoryCartopyTestCase) | cartopy not installed |
| core | test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryCartopyTestCase) | cartopy not installed |
| geodetics | test_gps_2_dist_azimuth_with_geographiclib (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) | Module geographiclib is not installed |
| geodetics | test_issue_375 (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) | Module geographiclib is not installed |
| io.nlloc | test_read_nlloc_scatter_coordinate_conversion (obspy.io.nlloc.tests.test_util.NLLOCTestCase) | pyproj not installed |
| io.shapefile | test_write_catalog_shapefile (obspy.io.shapefile.tests.test_core.ShapefileTestCase) | pyshp not installed |
| io.shapefile | test_write_catalog_shapefile_via_plugin (obspy.io.shapefile.tests.test_core.ShapefileTestCase) | pyshp not installed |
| io.shapefile | test_write_catalog_shapefile_with_extra_field (obspy.io.shapefile.tests.test_core.ShapefileTestCase) | pyshp not installed |
| io.shapefile | test_write_inventory_shapefile (obspy.io.shapefile.tests.test_core.ShapefileTestCase) | pyshp not installed |
| io.shapefile | test_write_inventory_shapefile_via_plugin (obspy.io.shapefile.tests.test_core.ShapefileTestCase) | pyshp not installed |
| io.shapefile | test_write_inventory_shapefile_with_extra_field (obspy.io.shapefile.tests.test_core.ShapefileTestCase) | pyshp not installed |
| taup | test_compute_ray_paths (obspy.taup.tests.test_ray_paths.RayPathCalculationsTestCase) | test needs geographiclib >= 1.34 |
| taup | test_p_iasp91_geo_manual (obspy.taup.tests.test_tau.TauPyModelTestCase) | Module geographiclib is not installed |
| taup | test_pierce_p_iasp91_geo (obspy.taup.tests.test_tau.TauPyModelTestCase) | test needs geographiclib >= 1.34 |
| taup | test_single_path_geo_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) | test needs geographiclib >= 1.34 |
| taup | test_path_geo (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) | Module geographiclib is not installed or too old. |
| taup | test_path_resampling (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) | Module geographiclib is not installed or too old. |
Slowest tests (20)
| Runtime | Test |
|---|---|
| 4.296s | __init__ (obspy.taup) |
| 4.292s | test_trim_floating_point_with_padding_2 (obspy.core.tests.test_trace.TraceTestCase) |
| 4.002s | read (obspy.core.stream) |
| 3.833s | test_response_calculation_from_seed_and_xseed (obspy.io.xseed.tests.test_core.CoreTestCase) |
| 3.161s | test_shoot_existing_ray_param (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase) |
| 2.672s | test_read_url_via_network (obspy.core.tests.test_stream.StreamTestCase) |
| 1.939s | plot_travel_times (obspy.taup.tau) |
| 1.929s | test_regional_models (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 1.604s | test_vs_java_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 1.560s | test_many_identically_named_phases (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase) |
| 1.163s | test_auto_read_arclink_xml (obspy.io.arclink.tests.test_inventory_xml.ArclinkInventoryTestCase) |
| 0.708s | __init__ (obspy.taup.tau.TauPyModel) |
| 0.636s | test_surface_wave_ttimes (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 0.599s | test_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 0.589s | test_kennet_ak135_ttime_tables_p_deep (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 0.561s | test_ak135 (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 0.546s | test_kennet_ak135_ttime_tables_p_shallow (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 0.524s | test_read_from_sds_with_wildcarded_seed_ids (obspy.clients.filesystem.tests.test_sds.SDSTestCase) |
| 0.511s | test_kennet_ak135_ttime_tables_s_shallow (obspy.taup.tests.test_tau.TauPyModelTestCase) |
| 0.480s | test_kennet_ak135_ttime_tables_s_deep (obspy.taup.tests.test_tau.TauPyModelTestCase) |