#136869 Report by node DESKTOP-RDMAEND covering 2060 tests from 59 modules resulted into 2 errors

Report

ObsPy version
1.4.0
GitHub Pull Request
-
Report file
JSON document
Total runtime
117.7 sec
Report date/time
Dec. 30, 2023, 5:17 p.m.

System / Python

Architecture
64bit
Machine
x86_64
Node
DESKTOP-RDMAEND
Processor
x86_64
Python Compiler
GCC 11.2.0
Python Implementation
CPython
Python Version
3.11.5
Release
5.15.133.1-microsoft-standard-WSL2
System
Linux
Version
#1 SMP Thu Oct 5 21:02:42 UTC 2023

Dependencies

cartopy
---
decorator
5.1.1
flake8
6.0.0
geographiclib
---
lxml
4.9.3
matplotlib
3.8.0
numpy
1.24.3
obspy
1.4.0
pyproj
---
pytest
7.4.0
pytest-json-report
1.5.0
requests
2.31.0
scipy
1.11.4
setuptools
68.0.0
shapefile
---
sqlalchemy
1.4.39

Modules (59)

Module Errors / Failures Tracebacks
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl - -
obspy.clients.seedlink Not tested -
obspy.clients.syngine Not tested -
obspy.core 2 1 2
obspy.core.event - -
obspy.core.inventory - -
obspy.core.util - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.alsep - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 2 2

Tracebacks (2)

1 core 

Traceback (most recent call last):
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 341, in from_call
result: Optional[TResult] = func()
^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 262, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_hooks.py", line 265, in __call__
return self._hookexec(self.name, self.get_hookimpls(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_manager.py", line 80, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 60, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_result.py", line 60, in get_result
raise ex[1].with_traceback(ex[2])
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 39, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call
raise e
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call
item.runtest()
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/python.py", line 1788, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_hooks.py", line 265, in __call__
return self._hookexec(self.name, self.get_hookimpls(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_manager.py", line 80, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 60, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_result.py", line 60, in get_result
raise ex[1].with_traceback(ex[2])
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 39, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/core/tests/test_trace.py", line 1360, in test_taper_onesided
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x7f86b0e9fcd0>, <warnings.WarningMessage object at 0x7f86b0e9ee10>])

2 core 

Traceback (most recent call last):
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 341, in from_call
result: Optional[TResult] = func()
^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 262, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_hooks.py", line 265, in __call__
return self._hookexec(self.name, self.get_hookimpls(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_manager.py", line 80, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 60, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_result.py", line 60, in get_result
raise ex[1].with_traceback(ex[2])
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 39, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call
raise e
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call
item.runtest()
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/python.py", line 1788, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_hooks.py", line 265, in __call__
return self._hookexec(self.name, self.get_hookimpls(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_manager.py", line 80, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 60, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_result.py", line 60, in get_result
raise ex[1].with_traceback(ex[2])
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/pluggy/_callers.py", line 39, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/core/tests/test_trace.py", line 1390, in test_taper_length
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x7f86b2c31f10>, <warnings.WarningMessage object at 0x7f86b2c319d0>])

Skipped tests (41)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_local Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_combined_station_event_plot Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_local Skipped: cartopy not installed
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_with_geographiclib Skipped: Module geographiclib is not installed
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_issue_375 Skipped: Module geographiclib is not installed
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.gcf io/gcf/core.py::obspy.io.gcf.core._write_gcf Skipped: all tests skipped by +SKIP option
io.nlloc io/nlloc/tests/test_util.py::NLLOCTestCase::test_read_nlloc_scatter_coordinate_conversion Skipped: pyproj not installed
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_with_extra_field Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_with_extra_field Skipped: pyshp not installed
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
taup taup/tests/test_ray_paths.py::TestRayPathCalculations::test_compute_ray_paths Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_p_iasp91_geo_manual Skipped: Module geographiclib is not installed
taup taup/tests/test_tau.py::TestTauPyModel::test_pierce_p_iasp91_geo Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_single_path_geo_iasp91 Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_geo Skipped: Module geographiclib is not installed or too old.
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_resampling Skipped: Module geographiclib is not installed or too old.

Slowest tests (20)

Runtime Test
5.035s core/stream.py::obspy.core.stream.read
3.500s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
3.129s taup/__init__.py::obspy.taup
3.030s io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
2.949s taup/tests/test_tau.py::TestTauPyModel::test_regional_models
2.178s signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
1.586s signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
1.583s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_many_identically_named_phases
1.472s core/tests/test_trace.py::TestTrace::test_remove_response_plot
1.463s signal/tf_misfit.py::obspy.signal.tf_misfit.plot_tfr
1.446s taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91
1.391s signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale
1.274s signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_restricted_stacks
1.076s taup/tests/test_taup_plotting.py::TestTauPyPlotting::test_spherical_many_phases
1.055s io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
1.044s taup/tests/test_tau.py::TestTauPyModel::test_high_slowness_crust
1.039s signal/tests/test_rotate.py::RotateTestCase::test_rotate2zne_against_lqt_different_combinations
1.027s core/tests/test_waveform_plugins.py::TestWaveformPlugins::test_read_thread_safe
0.953s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_huge
0.948s signal/tests/test_tf_misfit.py::TestTfPlot::test_plot_tf_gofs

Warnings (17)

Stage Filename Category Message
runtest <doctest obspy.signal._sosfilt._sosfilt[13]>:1 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/imaging/beachball.py:274 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/taup/tau.py:1115 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/signal/tests/test_polarization.py:64 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/imaging/scripts/scan.py:443 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/taup/tau.py:559 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/taup/tau.py:1228 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/signal/tests/test_polarization.py:62 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/signal/cross_correlation.py:985 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/taup/tau.py:247 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/signal/tests/test_hoctavbands.py:87 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/signal/tests/test_freqattributes.py:88 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/core/trace.py:2174 DeprecationWarning Importing hann from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hann' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/signal/tests/test_polarization.py:60 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/io/mseed/tests/test_mseed_util.py:75 DeprecationWarning NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 128 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/signal/tests/test_cpxtrace.py:85 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/geoclark/Programs/anaconda3/lib/python3.11/site-packages/obspy/core/util/misc.py:537 MatplotlibDeprecationWarning Auto-close()ing of figures upon backend switching is deprecated since 3.8 and will be removed two minor releases later. To suppress this warning, explicitly call plt.close('all') first.