#135048 Report by node gh-actions covering 2060 tests from 59 modules resulted into 11 errors
Report
- ObsPy version
- 1.4.0.post0+267.g5a86a83b3d.d…
- GitHub Pull Request
- https://github.com/obspy/obspy/pull/3339
- Report file
- JSON document
- Total runtime
- 248.5 sec
- Report date/time
- Aug. 9, 2023, 5:03 p.m.
System / Python
- Architecture
- 64bit
- Machine
- x86_64
- Node
- gh-actions
- Processor
- x86_64
- Python Compiler
- GCC 11.3.0
- Python Implementation
- CPython
- Python Version
- 3.9.16
- Release
- 5.15.0-1042-azure
- System
- Linux
- Version
- #49-Ubuntu SMP Tue Jul 11 17:28:46 UTC 2023
Dependencies
- cartopy
- 0.22.0
- decorator
- 5.1.1
- flake8
- ---
- geographiclib
- 2.0
- lxml
- 4.9.3
- matplotlib
- 3.7.2
- numpy
- 1.25.2
- obspy
- 1.4.0.post0+267.g5a86a83b3d.dirty
- pyproj
- 3.6.0
- pytest
- 7.4.0
- pytest-json-report
- 1.5.0
- requests
- 2.31.0
- scipy
- 1.11.1
- setuptools
- 68.0.0
- shapefile
- ---
- sqlalchemy
- 2.0.19
Modules (59)
Module | Errors / Failures | Tracebacks | ||||
---|---|---|---|---|---|---|
obspy.clients.earthworm | Not tested | - | - | - | - | - |
obspy.clients.fdsn | - | 13 | 13 | - | 0.04s | - |
obspy.clients.filesystem | 9 | 29 | 29 | - | 2.11s | 1 2 3 4 5 6 7 8 9 |
obspy.clients.iris | Not tested | - | - | - | - | - |
obspy.clients.neic | Not tested | - | - | - | - | - |
obspy.clients.nrl | - | 5 | 5 | - | 0.37s | - |
obspy.clients.seedlink | Not tested | - | - | - | - | - |
obspy.clients.syngine | Not tested | - | - | - | - | - |
obspy.core | 2 | 598 | 597 | 1 | 52.77s | 10 11 |
obspy.core.event | - | 18 | 18 | - | 0.28s | - |
obspy.core.inventory | - | 23 | 23 | - | 1.92s | - |
obspy.core.util | - | 23 | 20 | 3 | 0.19s | - |
obspy.geodetics | - | 21 | 20 | 1 | 0.23s | - |
obspy.imaging | - | 91 | 90 | 1 | 33.63s | - |
obspy.io.ah | - | 11 | 11 | - | 0.17s | - |
obspy.io.alsep | - | 16 | 16 | - | 2.56s | - |
obspy.io.arclink | - | 5 | 5 | - | 3.14s | - |
obspy.io.ascii | - | 28 | 26 | 2 | 0.21s | - |
obspy.io.cmtsolution | - | 10 | 10 | - | 0.10s | - |
obspy.io.cnv | - | 1 | 1 | - | 0.03s | - |
obspy.io.css | - | 10 | 10 | - | 0.27s | - |
obspy.io.dmx | - | 5 | 5 | - | 0.04s | - |
obspy.io.focmec | - | 8 | 8 | - | 0.16s | - |
obspy.io.gcf | - | 13 | 12 | 1 | 0.29s | - |
obspy.io.gse2 | - | 55 | 55 | - | 0.78s | - |
obspy.io.hypodd | - | 9 | 9 | - | 0.25s | - |
obspy.io.iaspei | - | 7 | 7 | - | 1.11s | - |
obspy.io.json | - | 4 | 4 | - | 0.05s | - |
obspy.io.kinemetrics | - | 8 | 8 | - | 0.87s | - |
obspy.io.kml | - | 3 | 3 | - | 0.18s | - |
obspy.io.mseed | - | 127 | 127 | - | 2.06s | - |
obspy.io.ndk | - | 20 | 20 | - | 0.61s | - |
obspy.io.nied | - | 11 | 11 | - | 0.10s | - |
obspy.io.nlloc | - | 14 | 14 | - | 0.56s | - |
obspy.io.nordic | - | 60 | 58 | 2 | 2.50s | - |
obspy.io.pdas | - | 3 | 3 | - | 0.02s | - |
obspy.io.pde | - | 13 | 12 | 1 | 0.45s | - |
obspy.io.quakeml | - | 38 | 37 | 1 | 0.71s | - |
obspy.io.reftek | - | 21 | 21 | - | 0.30s | - |
obspy.io.rg16 | - | 38 | 38 | - | 0.23s | - |
obspy.io.sac | - | 99 | 99 | - | 0.95s | - |
obspy.io.scardec | - | 5 | 5 | - | 0.11s | - |
obspy.io.seg2 | - | 2 | 2 | - | 0.02s | - |
obspy.io.segy | - | 56 | 56 | - | 0.61s | - |
obspy.io.seisan | - | 8 | 7 | 1 | 0.12s | - |
obspy.io.seiscomp | - | 49 | 49 | - | 2.25s | - |
obspy.io.sh | - | 26 | 24 | 2 | 0.65s | - |
obspy.io.shapefile | - | 7 | 7 | - | 0.67s | - |
obspy.io.stationtxt | - | 11 | 11 | - | 0.13s | - |
obspy.io.stationxml | - | 24 | 24 | - | 0.62s | - |
obspy.io.wav | - | 8 | 7 | 1 | 0.05s | - |
obspy.io.win | - | 2 | 2 | - | 0.15s | - |
obspy.io.xseed | - | 82 | 82 | - | 15.65s | - |
obspy.io.y | - | 5 | 4 | 1 | 0.03s | - |
obspy.io.zmap | - | 14 | 14 | - | 0.30s | - |
obspy.realtime | - | 22 | 22 | - | 0.64s | - |
obspy.scripts | - | 2 | 2 | - | 0.02s | - |
obspy.signal | - | 203 | 201 | 2 | 34.98s | - |
obspy.taup | - | 76 | 76 | - | 57.43s | - |
Summary | 11 | 2060 | 2040 | 20 | 248.46s | 11 |
Tracebacks (11)
055 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 056 057 * :meth:`~Client.get_availability_extent()`: 058 Returns a list of (network, station, location, channel, earliest, latest) 059 tuples that represent the full extent of available data. This example 060 retrieves from the very small obspy test tsindex database a list of all 061 available ("BHZ") channel extents from the Global Seismograph Network 062 ("IU") for all times. 063 064 >>> extents = client.get_availability_extent(network="IU", channel="BHZ") UNEXPECTED EXCEPTION: ValueError('Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490929430; network>, <sqlalchemy.sql.elements.Label at 0x7f2490929880; station>, <sqlalchemy.sql.elements.Label at 0x7f24909298e0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490929c10; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490929c70; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490929cd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490929430; network>, <sqlalchemy.sql.elements.Label at 0x7f2490929880; station>, <sqlalchemy.sql.elements.Label at 0x7f24909298e0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490929c10; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490929c70; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490929cd0; endtime>)?') Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490929430; network>, <sqlalchemy.sql.elements.Label at 0x7f2490929880; station>, <sqlalchemy.sql.elements.Label at 0x7f24909298e0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490929c10; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490929c70; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490929cd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490929430; network>, <sqlalchemy.sql.elements.Label at 0x7f2490929880; station>, <sqlalchemy.sql.elements.Label at 0x7f24909298e0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490929c10; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490929c70; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490929cd0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/doctest.py", line 1334, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.clients.filesystem.tsindex[6]>", line 1, in <module> File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent summary_rows = self._get_summary_rows(network, station, File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490929430; network>, <sqlalchemy.sql.elements.Label at 0x7f2490929880; station>, <sqlalchemy.sql.elements.Label at 0x7f24909298e0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490929c10; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490929c70; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490929cd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490929430; network>, <sqlalchemy.sql.elements.Label at 0x7f2490929880; station>, <sqlalchemy.sql.elements.Label at 0x7f24909298e0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490929c10; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490929c70; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490929cd0; endtime>)? /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py:64: UnexpectedException
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490842df0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490842070; station>, <sqlalchemy.sql.elements.Label at 0x7f2490842640; location>, <sqlalchemy.sql.elements.Label at 0x7f2490842700; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490842310; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490842c40; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490842df0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490842070; station>, <sqlalchemy.sql.elements.Label at 0x7f2490842640; location>, <sqlalchemy.sql.elements.Label at 0x7f2490842700; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490842310; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490842c40; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 380, in test_get_availability actual_avail = client.get_availability( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability tsindex_rows = self._get_tsindex_rows(network, station, File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows return self.request_handler._fetch_index_rows(query_rows) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490842df0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490842070; station>, <sqlalchemy.sql.elements.Label at 0x7f2490842640; location>, <sqlalchemy.sql.elements.Label at 0x7f2490842700; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490842310; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490842c40; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490842df0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490842070; station>, <sqlalchemy.sql.elements.Label at 0x7f2490842640; location>, <sqlalchemy.sql.elements.Label at 0x7f2490842700; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490842310; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490842c40; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490855100; network>, <sqlalchemy.sql.elements.Label at 0x7f249085ae80; station>, <sqlalchemy.sql.elements.Label at 0x7f249085adc0; location>, <sqlalchemy.sql.elements.Label at 0x7f249085aee0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249085a7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249085ac10; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490855100; network>, <sqlalchemy.sql.elements.Label at 0x7f249085ae80; station>, <sqlalchemy.sql.elements.Label at 0x7f249085adc0; location>, <sqlalchemy.sql.elements.Label at 0x7f249085aee0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249085a7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249085ac10; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 235, in test_get_availability_extent actual_avail_extents = client.get_availability_extent( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent summary_rows = self._get_summary_rows(network, station, File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490855100; network>, <sqlalchemy.sql.elements.Label at 0x7f249085ae80; station>, <sqlalchemy.sql.elements.Label at 0x7f249085adc0; location>, <sqlalchemy.sql.elements.Label at 0x7f249085aee0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249085a7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249085ac10; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490855100; network>, <sqlalchemy.sql.elements.Label at 0x7f249085ae80; station>, <sqlalchemy.sql.elements.Label at 0x7f249085adc0; location>, <sqlalchemy.sql.elements.Label at 0x7f249085aee0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249085a7c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249085ac10; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490743d60; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745070; station>, <sqlalchemy.sql.elements.Label at 0x7f24907454f0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745100; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745790; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490743d60; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745070; station>, <sqlalchemy.sql.elements.Label at 0x7f24907454f0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745100; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745790; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 174, in test_get_nslc actual_nslc = client.get_nslc("I*,CU", File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 317, in get_nslc summary_rows = self._get_summary_rows(network, station, location, File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490743d60; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745070; station>, <sqlalchemy.sql.elements.Label at 0x7f24907454f0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745100; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745790; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490743d60; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745070; station>, <sqlalchemy.sql.elements.Label at 0x7f24907454f0; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745100; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745790; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490743ac0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490743a60; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743b80; location>, <sqlalchemy.sql.elements.Label at 0x7f24907437c0; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490743c40; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907438e0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490743ac0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490743a60; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743b80; location>, <sqlalchemy.sql.elements.Label at 0x7f24907437c0; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490743c40; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907438e0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 61, in test_get_waveforms returned_stream = client.get_waveforms( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 262, in get_waveforms return self._get_waveforms(query_rows, merge) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms index_rows = self.request_handler._fetch_index_rows(query_rows) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490743ac0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490743a60; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743b80; location>, <sqlalchemy.sql.elements.Label at 0x7f24907437c0; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490743c40; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907438e0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490743ac0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490743a60; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743b80; location>, <sqlalchemy.sql.elements.Label at 0x7f24907437c0; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490743c40; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907438e0; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f249084c640; network>, <sqlalchemy.sql.elements.Label at 0x7f249084c9d0; station>, <sqlalchemy.sql.elements.Label at 0x7f249084c1f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e340; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e430; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490853760; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f249084c640; network>, <sqlalchemy.sql.elements.Label at 0x7f249084c9d0; station>, <sqlalchemy.sql.elements.Label at 0x7f249084c1f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e340; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e430; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490853760; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 141, in test_get_waveforms_bulk returned_stream = client.get_waveforms_bulk(bulk_request) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 288, in get_waveforms_bulk return self._get_waveforms(query_rows, merge) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms index_rows = self.request_handler._fetch_index_rows(query_rows) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f249084c640; network>, <sqlalchemy.sql.elements.Label at 0x7f249084c9d0; station>, <sqlalchemy.sql.elements.Label at 0x7f249084c1f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e340; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e430; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490853760; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f249084c640; network>, <sqlalchemy.sql.elements.Label at 0x7f249084c9d0; station>, <sqlalchemy.sql.elements.Label at 0x7f249084c1f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e340; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e430; starttime>, <sqlalchemy.sql.elements.Label at 0x7f2490853760; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f249084d790; network>, <sqlalchemy.sql.elements.Label at 0x7f249084d910; station>, <sqlalchemy.sql.elements.Label at 0x7f249084d7f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249084d850; channel>, <sqlalchemy.sql.elements.Label at 0x7f249084db20; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249084d8b0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f249084d790; network>, <sqlalchemy.sql.elements.Label at 0x7f249084d910; station>, <sqlalchemy.sql.elements.Label at 0x7f249084d7f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249084d850; channel>, <sqlalchemy.sql.elements.Label at 0x7f249084db20; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249084d8b0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 580, in test_has_data self.assertTrue(client.has_data()) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 558, in has_data avail_percentage = self.get_availability_percentage(network, File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 494, in get_availability_percentage avail = self.get_availability(network, station, File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability tsindex_rows = self._get_tsindex_rows(network, station, File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows return self.request_handler._fetch_index_rows(query_rows) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f249084d790; network>, <sqlalchemy.sql.elements.Label at 0x7f249084d910; station>, <sqlalchemy.sql.elements.Label at 0x7f249084d7f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249084d850; channel>, <sqlalchemy.sql.elements.Label at 0x7f249084db20; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249084d8b0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f249084d790; network>, <sqlalchemy.sql.elements.Label at 0x7f249084d910; station>, <sqlalchemy.sql.elements.Label at 0x7f249084d7f0; location>, <sqlalchemy.sql.elements.Label at 0x7f249084d850; channel>, <sqlalchemy.sql.elements.Label at 0x7f249084db20; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249084d8b0; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490745cd0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743d60; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e100; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249073e280; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490745cd0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743d60; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e100; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249073e280; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 773, in test_build_file_list self.assertRaisesRegex(OSError, File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 1282, in assertRaisesRegex return context.handle('assertRaisesRegex', args, kwargs) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 201, in handle callable_obj(*args, **kwargs) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1064, in build_file_list tsindex = self.request_handler._fetch_index_rows() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f2490745cd0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743d60; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e100; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249073e280; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f2490745cd0; network>, <sqlalchemy.sql.elements.Label at 0x7f2490745880; station>, <sqlalchemy.sql.elements.Label at 0x7f2490743d60; location>, <sqlalchemy.sql.elements.Label at 0x7f249073e5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f249073e100; starttime>, <sqlalchemy.sql.elements.Label at 0x7f249073e280; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__ self._raw_columns = [ File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp> coercions.expect( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion self._raise_for_expected(element, argname) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected return super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected super()._raise_for_expected( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f24907499a0; network>, <sqlalchemy.sql.elements.Label at 0x7f24907433a0; station>, <sqlalchemy.sql.elements.Label at 0x7f2490745b20; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745130; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745eb0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907456d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f24907499a0; network>, <sqlalchemy.sql.elements.Label at 0x7f24907433a0; station>, <sqlalchemy.sql.elements.Label at 0x7f2490745b20; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745130; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745eb0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907456d0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor yield File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run self._callTestMethod(testMethod) File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod method() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 919, in test__fetch_summary_rows ts_summary_data = request_handler._fetch_summary_rows( File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f24907499a0; network>, <sqlalchemy.sql.elements.Label at 0x7f24907433a0; station>, <sqlalchemy.sql.elements.Label at 0x7f2490745b20; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745130; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745eb0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907456d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f24907499a0; network>, <sqlalchemy.sql.elements.Label at 0x7f24907433a0; station>, <sqlalchemy.sql.elements.Label at 0x7f2490745b20; location>, <sqlalchemy.sql.elements.Label at 0x7f2490745130; channel>, <sqlalchemy.sql.elements.Label at 0x7f2490745eb0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f24907456d0; endtime>)?
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 341, in from_call result: Optional[TResult] = func() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 262, in <lambda> lambda: ihook(item=item, **kwds), when=when, reraise=reraise File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__ return self._hookexec(self.name, self._hookimpls, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 155, in _multicall return outcome.get_result() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_result.py", line 108, in get_result raise exc.with_traceback(exc.__traceback__) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall res = hook_impl.function(*args) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call raise e File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call item.runtest() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 1788, in runtest self.ihook.pytest_pyfunc_call(pyfuncitem=self) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__ return self._hookexec(self.name, self._hookimpls, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 116, in _multicall raise exception.with_traceback(exception.__traceback__) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall res = hook_impl.function(*args) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call result = testfunction(**testargs) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/core/tests/test_trace.py", line 1360, in test_taper_onesided assert len(w) == 1 AssertionError: assert 2 == 1 + where 2 = len([<warnings.WarningMessage object at 0x7f2487d4d8b0>, <warnings.WarningMessage object at 0x7f2487d4df40>])
Traceback (most recent call last): File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 341, in from_call result: Optional[TResult] = func() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 262, in <lambda> lambda: ihook(item=item, **kwds), when=when, reraise=reraise File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__ return self._hookexec(self.name, self._hookimpls, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 155, in _multicall return outcome.get_result() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_result.py", line 108, in get_result raise exc.with_traceback(exc.__traceback__) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall res = hook_impl.function(*args) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call raise e File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call item.runtest() File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 1788, in runtest self.ihook.pytest_pyfunc_call(pyfuncitem=self) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__ return self._hookexec(self.name, self._hookimpls, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 116, in _multicall raise exception.with_traceback(exception.__traceback__) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall res = hook_impl.function(*args) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call result = testfunction(**testargs) File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/core/tests/test_trace.py", line 1390, in test_taper_length assert len(w) == 1 AssertionError: assert 2 == 1 + where 2 = len([<warnings.WarningMessage object at 0x7f2487f95100>, <warnings.WarningMessage object at 0x7f2487f95250>])
Skipped tests (20)
Submodule | Test | Skip message |
---|---|---|
core | core/stream.py::obspy.core.stream._is_pickle | Skipped: all tests skipped by +SKIP option |
core.util | core/util/misc.py::obspy.core.util.misc.CatchOutput | Skipped: all tests skipped by +SKIP option |
core.util | core/util/misc.py::obspy.core.util.misc.SuppressOutput | Skipped: all tests skipped by +SKIP option |
core.util | core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory | Skipped: all tests skipped by +SKIP option |
geodetics | geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_bug150 | Skipped: Geographiclib installed, not using calc_vincenty_inverse |
imaging | imaging/tests/test_mopad_script.py::TestMopad::test_script_plot | Skipped: Currently broken until further review. |
io.ascii | io/ascii/core.py::obspy.io.ascii.core._is_slist | Skipped: all tests skipped by +SKIP option |
io.ascii | io/ascii/core.py::obspy.io.ascii.core._is_tspair | Skipped: all tests skipped by +SKIP option |
io.gcf | io/gcf/core.py::obspy.io.gcf.core._write_gcf | Skipped: all tests skipped by +SKIP option |
io.nordic | io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor | Skipped: all tests skipped by +SKIP option |
io.nordic | io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag | Skipped: all tests skipped by +SKIP option |
io.pde | io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr | Skipped: all tests skipped by +SKIP option |
io.quakeml | io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml | Skipped: all tests skipped by +SKIP option |
io.seisan | io/seisan/core.py::obspy.io.seisan.core._is_seisan | Skipped: all tests skipped by +SKIP option |
io.sh | io/sh/core.py::obspy.io.sh.core._is_asc | Skipped: all tests skipped by +SKIP option |
io.sh | io/sh/core.py::obspy.io.sh.core._is_q | Skipped: all tests skipped by +SKIP option |
io.wav | io/wav/core.py::obspy.io.wav.core._is_wav | Skipped: all tests skipped by +SKIP option |
io.y | io/y/core.py::obspy.io.y.core._is_y | Skipped: all tests skipped by +SKIP option |
signal | signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata | Skipped: all tests skipped by +SKIP option |
signal | signal/tests/test_quality_control.py::QualityControlTestCase::test_schema_validation | Skipped: Test requires the jsonschema module |
Slowest tests (20)
Warnings (36)
Stage | Filename | Category | Message |
---|---|---|---|
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_polarization.py:62 | DeprecationWarning | Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/io/mseed/tests/test_mseed_util.py:75 | DeprecationWarning | NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 128 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype) will give the desired result (the cast overflows). |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:420 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/taup_geo.py:91 | DeprecationWarning | `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:265 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_cpxtrace.py:85 | DeprecationWarning | Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_hoctavbands.py:87 | DeprecationWarning | Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:245 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_polarization.py:64 | DeprecationWarning | Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tf_misfit.py:1344 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:301 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:419 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:391 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
collect | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/db.py:18 | MovedIn20Warning | The ``declarative_base()`` function is now available as sqlalchemy.orm.declarative_base(). (deprecated since: 2.0) (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/seismic_phase.py:1618 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/core/trace.py:2174 | DeprecationWarning | Importing hann from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hann' or the convenience function 'scipy.signal.get_window' instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/imaging/scripts/mopad.py:840 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:285 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:286 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:243 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:244 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py:194 | DeprecationWarning | `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/imaging/scripts/scan.py:437 | UserWarning | The figure layout has changed to tight |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/slowness_model.py:1818 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:300 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:389 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:299 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_polarization.py:60 | DeprecationWarning | Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tf_misfit.py:1084 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:284 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:390 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:264 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:418 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/seismic_phase.py:1645 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_freqattributes.py:88 | DeprecationWarning | Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead. |
runtest | /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:263 | DeprecationWarning | Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) |