#134462 Report by node kozel covering 2022 tests from 60 modules resulted into 20 errors
Report
- ObsPy version
- 1.3.1
- GitHub Pull Request
- -
- Report file
- JSON document
- Total runtime
- 167.9 sec
- Report date/time
- May 16, 2023, 12:53 p.m.
System / Python
- Architecture
- 64bit
- Machine
- arm64
- Node
- kozel
- Processor
- arm
- Python Compiler
- Clang 14.0.3 (clang-1403.0.22.14.1)
- Python Implementation
- CPython
- Python Version
- 3.10.11
- Release
- 22.4.0
- System
- Darwin
- Version
- Darwin Kernel Version 22.4.0: Mon Mar 6 20:59:28 PST 2023; root:xnu-8796.101.5~3/RELEASE_ARM64_T6000
Dependencies
- cartopy
- 0.21.0
- decorator
- 5.1.1
- flake8
- ---
- geographiclib
- 1.50
- lxml
- 4.9.1
- matplotlib
- 3.7.1
- numpy
- 1.24.1
- obspy
- 1.3.1
- pyproj
- 3.4.1
- pytest
- 7.3.1
- pytest-json-report
- 1.5.0
- requests
- 2.30.0
- scipy
- 1.10.1
- setuptools
- 67.7.2
- shapefile
- ---
- sqlalchemy
- 2.0.12
Modules (60)
Module | Errors / Failures | Tracebacks | ||||
---|---|---|---|---|---|---|
obspy.clients.earthworm | Not tested | - | - | - | - | - |
obspy.clients.fdsn | - | 13 | 13 | - | 0.56s | - |
obspy.clients.filesystem | 12 | 29 | 29 | - | 5.31s | 1 2 3 4 5 6 7 8 9 10 11 12 |
obspy.clients.iris | Not tested | - | - | - | - | - |
obspy.clients.neic | Not tested | - | - | - | - | - |
obspy.clients.nrl | - | 5 | 5 | - | 0.38s | - |
obspy.clients.seedlink | Not tested | - | - | - | - | - |
obspy.clients.seishub | Not tested | - | - | - | - | - |
obspy.clients.syngine | Not tested | - | - | - | - | - |
obspy.core | 8 | 597 | 596 | 1 | 24.36s | 13 14 15 16 17 18 19 20 |
obspy.core.event | - | 18 | 18 | - | 0.36s | - |
obspy.core.inventory | - | 23 | 23 | - | 0.94s | - |
obspy.core.util | - | 23 | 20 | 3 | 0.30s | - |
obspy.db | Not tested | - | - | - | - | - |
obspy.geodetics | - | 21 | 20 | 1 | 0.21s | - |
obspy.imaging | - | 89 | 88 | 1 | 13.50s | - |
obspy.io.ah | - | 5 | 5 | - | 0.10s | - |
obspy.io.arclink | - | 5 | 5 | - | 0.71s | - |
obspy.io.ascii | - | 28 | 26 | 2 | 0.57s | - |
obspy.io.cmtsolution | - | 10 | 10 | - | 0.27s | - |
obspy.io.cnv | - | 1 | 1 | - | 0.06s | - |
obspy.io.css | - | 10 | 10 | - | 0.23s | - |
obspy.io.dmx | - | 5 | 5 | - | 0.08s | - |
obspy.io.focmec | - | 8 | 8 | - | 0.08s | - |
obspy.io.gcf | - | 9 | 9 | - | 0.08s | - |
obspy.io.gse2 | - | 55 | 55 | - | 0.53s | - |
obspy.io.hypodd | - | 9 | 9 | - | 0.22s | - |
obspy.io.iaspei | - | 7 | 7 | - | 0.30s | - |
obspy.io.json | - | 4 | 4 | - | 0.05s | - |
obspy.io.kinemetrics | - | 8 | 8 | - | 0.37s | - |
obspy.io.kml | - | 3 | 3 | - | 0.12s | - |
obspy.io.mseed | - | 127 | 127 | - | 12.65s | - |
obspy.io.ndk | - | 20 | 20 | - | 0.63s | - |
obspy.io.nied | - | 11 | 11 | - | 0.15s | - |
obspy.io.nlloc | - | 13 | 13 | - | 0.20s | - |
obspy.io.nordic | - | 60 | 58 | 2 | 1.82s | - |
obspy.io.pdas | - | 3 | 3 | - | 0.04s | - |
obspy.io.pde | - | 13 | 12 | 1 | 0.21s | - |
obspy.io.quakeml | - | 38 | 37 | 1 | 0.79s | - |
obspy.io.reftek | - | 21 | 21 | - | 0.37s | - |
obspy.io.rg16 | - | 38 | 38 | - | 0.25s | - |
obspy.io.sac | - | 96 | 96 | - | 2.06s | - |
obspy.io.scardec | - | 5 | 5 | - | 0.15s | - |
obspy.io.seg2 | - | 2 | 2 | - | 0.05s | - |
obspy.io.segy | - | 56 | 56 | - | 0.92s | - |
obspy.io.seisan | - | 8 | 7 | 1 | 0.12s | - |
obspy.io.seiscomp | - | 49 | 49 | - | 3.80s | - |
obspy.io.sh | - | 26 | 24 | 2 | 0.47s | - |
obspy.io.shapefile | - | 7 | 7 | - | 0.42s | - |
obspy.io.stationtxt | - | 11 | 11 | - | 0.21s | - |
obspy.io.stationxml | - | 24 | 24 | - | 0.59s | - |
obspy.io.wav | - | 8 | 7 | 1 | 0.13s | - |
obspy.io.win | - | 2 | 2 | - | 0.05s | - |
obspy.io.xseed | - | 82 | 82 | - | 8.75s | - |
obspy.io.y | - | 5 | 4 | 1 | 0.07s | - |
obspy.io.zmap | - | 14 | 14 | - | 0.30s | - |
obspy.realtime | - | 22 | 22 | - | 0.30s | - |
obspy.scripts | - | 2 | 2 | - | 0.05s | - |
obspy.signal | - | 203 | 202 | 1 | 17.02s | - |
obspy.taup | - | 71 | 71 | - | 15.22s | - |
Summary | 20 | 2022 | 2004 | 18 | 167.91s | 20 |
Tracebacks (20)
055 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 056 057 * :meth:`~Client.get_availability_extent()`: 058 Returns a list of (network, station, location, channel, earliest, latest) 059 tuples that represent the full extent of available data. This example 060 retrieves from the very small obspy test tsindex database a list of all 061 available ("BHZ") channel extents from the Global Seismograph Network 062 ("IU") for all times. 063 064 >>> extents = client.get_availability_extent(network="IU", channel="BHZ") UNEXPECTED EXCEPTION: ValueError('Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x165f644f0; network>, <sqlalchemy.sql.elements.Label at 0x165f648e0; station>, <sqlalchemy.sql.elements.Label at 0x165f64940; location>, <sqlalchemy.sql.elements.Label at 0x165f64bb0; channel>, <sqlalchemy.sql.elements.Label at 0x165f64c70; starttime>, <sqlalchemy.sql.elements.Label at 0x165f64cd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x165f644f0; network>, <sqlalchemy.sql.elements.Label at 0x165f648e0; station>, <sqlalchemy.sql.elements.Label at 0x165f64940; location>, <sqlalchemy.sql.elements.Label at 0x165f64bb0; channel>, <sqlalchemy.sql.elements.Label at 0x165f64c70; starttime>, <sqlalchemy.sql.elements.Label at 0x165f64cd0; endtime>)?') Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x165f644f0; network>, <sqlalchemy.sql.elements.Label at 0x165f648e0; station>, <sqlalchemy.sql.elements.Label at 0x165f64940; location>, <sqlalchemy.sql.elements.Label at 0x165f64bb0; channel>, <sqlalchemy.sql.elements.Label at 0x165f64c70; starttime>, <sqlalchemy.sql.elements.Label at 0x165f64cd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x165f644f0; network>, <sqlalchemy.sql.elements.Label at 0x165f648e0; station>, <sqlalchemy.sql.elements.Label at 0x165f64940; location>, <sqlalchemy.sql.elements.Label at 0x165f64bb0; channel>, <sqlalchemy.sql.elements.Label at 0x165f64c70; starttime>, <sqlalchemy.sql.elements.Label at 0x165f64cd0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/doctest.py", line 1350, in __run exec(compile(example.source, filename, "single", File "<doctest obspy.clients.filesystem.tsindex[6]>", line 1, in <module> File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent summary_rows = self._get_summary_rows(network, station, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x165f644f0; network>, <sqlalchemy.sql.elements.Label at 0x165f648e0; station>, <sqlalchemy.sql.elements.Label at 0x165f64940; location>, <sqlalchemy.sql.elements.Label at 0x165f64bb0; channel>, <sqlalchemy.sql.elements.Label at 0x165f64c70; starttime>, <sqlalchemy.sql.elements.Label at 0x165f64cd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x165f644f0; network>, <sqlalchemy.sql.elements.Label at 0x165f648e0; station>, <sqlalchemy.sql.elements.Label at 0x165f64940; location>, <sqlalchemy.sql.elements.Label at 0x165f64bb0; channel>, <sqlalchemy.sql.elements.Label at 0x165f64c70; starttime>, <sqlalchemy.sql.elements.Label at 0x165f64cd0; endtime>)? /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py:64: UnexpectedException
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1660fc250; network>, <sqlalchemy.sql.elements.Label at 0x1660fde70; station>, <sqlalchemy.sql.elements.Label at 0x1660fd480; location>, <sqlalchemy.sql.elements.Label at 0x1660ffe80; channel>, <sqlalchemy.sql.elements.Label at 0x1660fd690; starttime>, <sqlalchemy.sql.elements.Label at 0x1660fe830; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1660fc250; network>, <sqlalchemy.sql.elements.Label at 0x1660fde70; station>, <sqlalchemy.sql.elements.Label at 0x1660fd480; location>, <sqlalchemy.sql.elements.Label at 0x1660ffe80; channel>, <sqlalchemy.sql.elements.Label at 0x1660fd690; starttime>, <sqlalchemy.sql.elements.Label at 0x1660fe830; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 381, in test_get_availability actual_avail = client.get_availability( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability tsindex_rows = self._get_tsindex_rows(network, station, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows return self.request_handler._fetch_index_rows(query_rows) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1660fc250; network>, <sqlalchemy.sql.elements.Label at 0x1660fde70; station>, <sqlalchemy.sql.elements.Label at 0x1660fd480; location>, <sqlalchemy.sql.elements.Label at 0x1660ffe80; channel>, <sqlalchemy.sql.elements.Label at 0x1660fd690; starttime>, <sqlalchemy.sql.elements.Label at 0x1660fe830; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1660fc250; network>, <sqlalchemy.sql.elements.Label at 0x1660fde70; station>, <sqlalchemy.sql.elements.Label at 0x1660fd480; location>, <sqlalchemy.sql.elements.Label at 0x1660ffe80; channel>, <sqlalchemy.sql.elements.Label at 0x1660fd690; starttime>, <sqlalchemy.sql.elements.Label at 0x1660fe830; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1660f7520; network>, <sqlalchemy.sql.elements.Label at 0x1660f7cd0; station>, <sqlalchemy.sql.elements.Label at 0x1660f6da0; location>, <sqlalchemy.sql.elements.Label at 0x1660f62c0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f5f90; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f7c10; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1660f7520; network>, <sqlalchemy.sql.elements.Label at 0x1660f7cd0; station>, <sqlalchemy.sql.elements.Label at 0x1660f6da0; location>, <sqlalchemy.sql.elements.Label at 0x1660f62c0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f5f90; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f7c10; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 236, in test_get_availability_extent actual_avail_extents = client.get_availability_extent( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent summary_rows = self._get_summary_rows(network, station, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1660f7520; network>, <sqlalchemy.sql.elements.Label at 0x1660f7cd0; station>, <sqlalchemy.sql.elements.Label at 0x1660f6da0; location>, <sqlalchemy.sql.elements.Label at 0x1660f62c0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f5f90; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f7c10; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1660f7520; network>, <sqlalchemy.sql.elements.Label at 0x1660f7cd0; station>, <sqlalchemy.sql.elements.Label at 0x1660f6da0; location>, <sqlalchemy.sql.elements.Label at 0x1660f62c0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f5f90; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f7c10; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614d960; network>, <sqlalchemy.sql.elements.Label at 0x16614fd00; station>, <sqlalchemy.sql.elements.Label at 0x16614d810; location>, <sqlalchemy.sql.elements.Label at 0x165f654e0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65330; starttime>, <sqlalchemy.sql.elements.Label at 0x165f65cc0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614d960; network>, <sqlalchemy.sql.elements.Label at 0x16614fd00; station>, <sqlalchemy.sql.elements.Label at 0x16614d810; location>, <sqlalchemy.sql.elements.Label at 0x165f654e0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65330; starttime>, <sqlalchemy.sql.elements.Label at 0x165f65cc0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 175, in test_get_nslc actual_nslc = client.get_nslc("I*,CU", File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 317, in get_nslc summary_rows = self._get_summary_rows(network, station, location, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows return self.request_handler._fetch_summary_rows(query_rows) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614d960; network>, <sqlalchemy.sql.elements.Label at 0x16614fd00; station>, <sqlalchemy.sql.elements.Label at 0x16614d810; location>, <sqlalchemy.sql.elements.Label at 0x165f654e0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65330; starttime>, <sqlalchemy.sql.elements.Label at 0x165f65cc0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614d960; network>, <sqlalchemy.sql.elements.Label at 0x16614fd00; station>, <sqlalchemy.sql.elements.Label at 0x16614d810; location>, <sqlalchemy.sql.elements.Label at 0x165f654e0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65330; starttime>, <sqlalchemy.sql.elements.Label at 0x165f65cc0; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614dcf0; network>, <sqlalchemy.sql.elements.Label at 0x16614c310; station>, <sqlalchemy.sql.elements.Label at 0x16614f5e0; location>, <sqlalchemy.sql.elements.Label at 0x16614df60; channel>, <sqlalchemy.sql.elements.Label at 0x16614f4f0; starttime>, <sqlalchemy.sql.elements.Label at 0x16614cac0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614dcf0; network>, <sqlalchemy.sql.elements.Label at 0x16614c310; station>, <sqlalchemy.sql.elements.Label at 0x16614f5e0; location>, <sqlalchemy.sql.elements.Label at 0x16614df60; channel>, <sqlalchemy.sql.elements.Label at 0x16614f4f0; starttime>, <sqlalchemy.sql.elements.Label at 0x16614cac0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 62, in test_get_waveforms returned_stream = client.get_waveforms( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 262, in get_waveforms return self._get_waveforms(query_rows, merge) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms index_rows = self.request_handler._fetch_index_rows(query_rows) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614dcf0; network>, <sqlalchemy.sql.elements.Label at 0x16614c310; station>, <sqlalchemy.sql.elements.Label at 0x16614f5e0; location>, <sqlalchemy.sql.elements.Label at 0x16614df60; channel>, <sqlalchemy.sql.elements.Label at 0x16614f4f0; starttime>, <sqlalchemy.sql.elements.Label at 0x16614cac0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614dcf0; network>, <sqlalchemy.sql.elements.Label at 0x16614c310; station>, <sqlalchemy.sql.elements.Label at 0x16614f5e0; location>, <sqlalchemy.sql.elements.Label at 0x16614df60; channel>, <sqlalchemy.sql.elements.Label at 0x16614f4f0; starttime>, <sqlalchemy.sql.elements.Label at 0x16614cac0; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614e8f0; network>, <sqlalchemy.sql.elements.Label at 0x16614d330; station>, <sqlalchemy.sql.elements.Label at 0x16614cf40; location>, <sqlalchemy.sql.elements.Label at 0x1661217e0; channel>, <sqlalchemy.sql.elements.Label at 0x166123a90; starttime>, <sqlalchemy.sql.elements.Label at 0x166123940; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614e8f0; network>, <sqlalchemy.sql.elements.Label at 0x16614d330; station>, <sqlalchemy.sql.elements.Label at 0x16614cf40; location>, <sqlalchemy.sql.elements.Label at 0x1661217e0; channel>, <sqlalchemy.sql.elements.Label at 0x166123a90; starttime>, <sqlalchemy.sql.elements.Label at 0x166123940; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 142, in test_get_waveforms_bulk returned_stream = client.get_waveforms_bulk(bulk_request) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 288, in get_waveforms_bulk return self._get_waveforms(query_rows, merge) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms index_rows = self.request_handler._fetch_index_rows(query_rows) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614e8f0; network>, <sqlalchemy.sql.elements.Label at 0x16614d330; station>, <sqlalchemy.sql.elements.Label at 0x16614cf40; location>, <sqlalchemy.sql.elements.Label at 0x1661217e0; channel>, <sqlalchemy.sql.elements.Label at 0x166123a90; starttime>, <sqlalchemy.sql.elements.Label at 0x166123940; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614e8f0; network>, <sqlalchemy.sql.elements.Label at 0x16614d330; station>, <sqlalchemy.sql.elements.Label at 0x16614cf40; location>, <sqlalchemy.sql.elements.Label at 0x1661217e0; channel>, <sqlalchemy.sql.elements.Label at 0x166123a90; starttime>, <sqlalchemy.sql.elements.Label at 0x166123940; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1660f47f0; network>, <sqlalchemy.sql.elements.Label at 0x1660f5120; station>, <sqlalchemy.sql.elements.Label at 0x1660f72e0; location>, <sqlalchemy.sql.elements.Label at 0x1660f5bd0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f40a0; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f5db0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1660f47f0; network>, <sqlalchemy.sql.elements.Label at 0x1660f5120; station>, <sqlalchemy.sql.elements.Label at 0x1660f72e0; location>, <sqlalchemy.sql.elements.Label at 0x1660f5bd0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f40a0; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f5db0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 581, in test_has_data self.assertTrue(client.has_data()) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 558, in has_data avail_percentage = self.get_availability_percentage(network, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 494, in get_availability_percentage avail = self.get_availability(network, station, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability tsindex_rows = self._get_tsindex_rows(network, station, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows return self.request_handler._fetch_index_rows(query_rows) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1660f47f0; network>, <sqlalchemy.sql.elements.Label at 0x1660f5120; station>, <sqlalchemy.sql.elements.Label at 0x1660f72e0; location>, <sqlalchemy.sql.elements.Label at 0x1660f5bd0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f40a0; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f5db0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1660f47f0; network>, <sqlalchemy.sql.elements.Label at 0x1660f5120; station>, <sqlalchemy.sql.elements.Label at 0x1660f72e0; location>, <sqlalchemy.sql.elements.Label at 0x1660f5bd0; channel>, <sqlalchemy.sql.elements.Label at 0x1660f40a0; starttime>, <sqlalchemy.sql.elements.Label at 0x1660f5db0; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 705, in test__get_leap_seconds_file open(test_file, 'a').close() PermissionError: [Errno 13] Permission denied: '/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/data/tsindex_data/leap-seconds.list'
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614d4e0; network>, <sqlalchemy.sql.elements.Label at 0x16614ecb0; station>, <sqlalchemy.sql.elements.Label at 0x16614e8f0; location>, <sqlalchemy.sql.elements.Label at 0x16614e950; channel>, <sqlalchemy.sql.elements.Label at 0x16614ff10; starttime>, <sqlalchemy.sql.elements.Label at 0x16614eef0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614d4e0; network>, <sqlalchemy.sql.elements.Label at 0x16614ecb0; station>, <sqlalchemy.sql.elements.Label at 0x16614e8f0; location>, <sqlalchemy.sql.elements.Label at 0x16614e950; channel>, <sqlalchemy.sql.elements.Label at 0x16614ff10; starttime>, <sqlalchemy.sql.elements.Label at 0x16614eef0; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 770, in test_build_file_list self.assertRaisesRegex(OSError, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/unittest/case.py", line 1291, in assertRaisesRegex return context.handle('assertRaisesRegex', args, kwargs) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/unittest/case.py", line 201, in handle callable_obj(*args, **kwargs) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1064, in build_file_list tsindex = self.request_handler._fetch_index_rows() File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x16614d4e0; network>, <sqlalchemy.sql.elements.Label at 0x16614ecb0; station>, <sqlalchemy.sql.elements.Label at 0x16614e8f0; location>, <sqlalchemy.sql.elements.Label at 0x16614e950; channel>, <sqlalchemy.sql.elements.Label at 0x16614ff10; starttime>, <sqlalchemy.sql.elements.Label at 0x16614eef0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x16614d4e0; network>, <sqlalchemy.sql.elements.Label at 0x16614ecb0; station>, <sqlalchemy.sql.elements.Label at 0x16614e8f0; location>, <sqlalchemy.sql.elements.Label at 0x16614e950; channel>, <sqlalchemy.sql.elements.Label at 0x16614ff10; starttime>, <sqlalchemy.sql.elements.Label at 0x16614eef0; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1131, in download_leap_seconds_file with open(file_path, "w") as fh: PermissionError: [Errno 13] Permission denied: '/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/data/tsindex_data/leap-seconds.list' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 656, in test_download_leap_seconds_file file_path = indexer.download_leap_seconds_file(test_file) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1134, in download_leap_seconds_file raise OSError("Failed to create leap seconds file at {} due to {}." OSError: Failed to create leap seconds file at /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/data/tsindex_data/leap-seconds.list due to [Errno 13] Permission denied: '/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/data/tsindex_data/leap-seconds.list'.
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1131, in download_leap_seconds_file with open(file_path, "w") as fh: PermissionError: [Errno 13] Permission denied: '/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/data/tsindex_data/leap-seconds.list' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 671, in test_download_leap_seconds_file_no_path_given file_path = indexer.download_leap_seconds_file() File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1134, in download_leap_seconds_file raise OSError("Failed to create leap seconds file at {} due to {}." OSError: Failed to create leap seconds file at /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/data/tsindex_data/leap-seconds.list due to [Errno 13] Permission denied: '/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/data/tsindex_data/leap-seconds.list'.
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows stmts = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp> sa.select([ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select return Select(*entities) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5132, in __init__ self._raw_columns = [ File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/selectable.py", line 5133, in <listcomp> coercions.expect( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect resolved = impl._literal_coercion( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 652, in _literal_coercion self._raise_for_expected(element, argname) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 1143, in _raise_for_expected return super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 711, in _raise_for_expected super()._raise_for_expected( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sqlalchemy/sql/coercions.py", line 536, in _raise_for_expected raise exc.ArgumentError(msg, code=code) from err sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x165f67c40; network>, <sqlalchemy.sql.elements.Label at 0x165f67be0; station>, <sqlalchemy.sql.elements.Label at 0x165f66320; location>, <sqlalchemy.sql.elements.Label at 0x165f66da0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65750; starttime>, <sqlalchemy.sql.elements.Label at 0x165f66500; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x165f67c40; network>, <sqlalchemy.sql.elements.Label at 0x165f67be0; station>, <sqlalchemy.sql.elements.Label at 0x165f66320; location>, <sqlalchemy.sql.elements.Label at 0x165f66da0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65750; starttime>, <sqlalchemy.sql.elements.Label at 0x165f66500; endtime>)? During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 916, in test__fetch_summary_rows ts_summary_data = request_handler._fetch_summary_rows( File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows raise ValueError(str(err)) ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x165f67c40; network>, <sqlalchemy.sql.elements.Label at 0x165f67be0; station>, <sqlalchemy.sql.elements.Label at 0x165f66320; location>, <sqlalchemy.sql.elements.Label at 0x165f66da0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65750; starttime>, <sqlalchemy.sql.elements.Label at 0x165f66500; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x165f67c40; network>, <sqlalchemy.sql.elements.Label at 0x165f67be0; station>, <sqlalchemy.sql.elements.Label at 0x165f66320; location>, <sqlalchemy.sql.elements.Label at 0x165f66da0; channel>, <sqlalchemy.sql.elements.Label at 0x165f65750; starttime>, <sqlalchemy.sql.elements.Label at 0x165f66500; endtime>)?
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_event.py", line 120, in test_plot_farfield_without_quiver_with_maps ev.plot(kind=[['global'], ['ortho', 'beachball'], File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/event/event.py", line 257, in plot fig, axes, kind_ = _setup_figure_and_axes(kind, File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/source.py", line 72, in _setup_figure_and_axes import cartopy.crs as ccrs File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_inventory.py", line 699, in test_location_plot_global inv.plot(method='cartopy', outfile=image_path) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/inventory/inventory.py", line 965, in plot from obspy.imaging.maps import plot_map File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/maps.py", line 28, in <module> import cartopy File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_inventory.py", line 707, in test_location_plot_ortho inv.plot(method='cartopy', projection='ortho', resolution='c', File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/inventory/inventory.py", line 965, in plot from obspy.imaging.maps import plot_map File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/maps.py", line 28, in <module> import cartopy File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_inventory.py", line 717, in test_location_plot_local inv.plot(method='cartopy', projection='local', resolution='50m', File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/inventory/inventory.py", line 965, in plot from obspy.imaging.maps import plot_map File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/maps.py", line 28, in <module> import cartopy File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_inventory.py", line 728, in test_combined_station_event_plot fig = inv.plot(show=False) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/inventory/inventory.py", line 965, in plot from obspy.imaging.maps import plot_map File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/maps.py", line 28, in <module> import cartopy File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_network.py", line 324, in test_location_plot_global net.plot(method='cartopy', outfile=image_path) File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/inventory/network.py", line 605, in plot from obspy.imaging.maps import plot_map File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/maps.py", line 28, in <module> import cartopy File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_network.py", line 332, in test_location_plot_ortho net.plot(method='cartopy', projection='ortho', resolution='c', File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/inventory/network.py", line 605, in plot from obspy.imaging.maps import plot_map File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/maps.py", line 28, in <module> import cartopy File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Traceback (most recent call last): File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/tests/test_network.py", line 342, in test_location_plot_local net.plot(method='cartopy', projection='local', resolution='50m', File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/core/inventory/network.py", line 605, in plot from obspy.imaging.maps import plot_map File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/imaging/maps.py", line 28, in <module> import cartopy File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/__init__.py", line 107, in <module> import cartopy.crs # noqa: E402 module-level imports File "/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/cartopy/crs.py", line 27, in <module> import cartopy.trace File "lib/cartopy/trace.pyx", line 56, in init cartopy.trace ImportError: cannot import name lgeos
Skipped tests (18)
Submodule | Test | Skip message |
---|---|---|
core | core/stream.py::obspy.core.stream._is_pickle | Skipped: all tests skipped by +SKIP option |
core.util | core/util/misc.py::obspy.core.util.misc.CatchOutput | Skipped: all tests skipped by +SKIP option |
core.util | core/util/misc.py::obspy.core.util.misc.SuppressOutput | Skipped: all tests skipped by +SKIP option |
core.util | core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory | Skipped: all tests skipped by +SKIP option |
geodetics | geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_bug150 | Skipped: Geographiclib installed, not using calc_vincenty_inverse |
imaging | imaging/tests/test_mopad_script.py::TestMopad::test_script_plot | Skipped: Currently broken until further review. |
io.ascii | io/ascii/core.py::obspy.io.ascii.core._is_slist | Skipped: all tests skipped by +SKIP option |
io.ascii | io/ascii/core.py::obspy.io.ascii.core._is_tspair | Skipped: all tests skipped by +SKIP option |
io.nordic | io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor | Skipped: all tests skipped by +SKIP option |
io.nordic | io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag | Skipped: all tests skipped by +SKIP option |
io.pde | io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr | Skipped: all tests skipped by +SKIP option |
io.quakeml | io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml | Skipped: all tests skipped by +SKIP option |
io.seisan | io/seisan/core.py::obspy.io.seisan.core._is_seisan | Skipped: all tests skipped by +SKIP option |
io.sh | io/sh/core.py::obspy.io.sh.core._is_asc | Skipped: all tests skipped by +SKIP option |
io.sh | io/sh/core.py::obspy.io.sh.core._is_q | Skipped: all tests skipped by +SKIP option |
io.wav | io/wav/core.py::obspy.io.wav.core._is_wav | Skipped: all tests skipped by +SKIP option |
io.y | io/y/core.py::obspy.io.y.core._is_y | Skipped: all tests skipped by +SKIP option |
signal | signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata | Skipped: all tests skipped by +SKIP option |
Slowest tests (20)
Warnings (6)
Stage | Filename | Category | Message |
---|---|---|---|
config | /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/_pytest/cacheprovider.py:433 | PytestCacheWarning | could not create cache path /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/.pytest_cache/v/cache/nodeids |
runtest | /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/io/mseed/tests/test_mseed_util.py:75 | DeprecationWarning | NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 128 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows). |
config | /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/_pytest/stepwise.py:56 | PytestCacheWarning | could not create cache path /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/.pytest_cache/v/cache/stepwise |
config | /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/_pytest/cacheprovider.py:387 | PytestCacheWarning | could not create cache path /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/.pytest_cache/v/cache/lastfailed |
runtest | /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/multiprocessing/resource_tracker.py:104 | UserWarning | resource_tracker: process died unexpectedly, relaunching. Some resources might leak. |
collect | /opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/obspy/clients/filesystem/db.py:18 | MovedIn20Warning | The ``declarative_base()`` function is now available as sqlalchemy.orm.declarative_base(). (deprecated since: 2.0) (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9) |