#128388 Report by node gh-actions covering 2022 tests from 60 modules resulted into 1 error

Report

ObsPy version
1.3.1rc2.post0+3.g4ce0adb07e
GitHub Pull Request
https://github.com/obspy/obspy/pull/3178
Report file
JSON document
Total runtime
206.5 sec
Report date/time
Oct. 13, 2022, 8:50 a.m.

System / Python

Architecture
64bit
Machine
x86_64
Node
gh-actions
Processor
x86_64
Python Compiler
GCC 9.4.0
Python Implementation
CPython
Python Version
3.7.12
Release
5.15.0-1020-azure
System
Linux
Version
#25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022

Dependencies

cartopy
0.17.0
decorator
5.1.1
flake8
---
geographiclib
2.0
lxml
4.9.1
matplotlib
3.2.2
numpy
1.15.4
obspy
1.3.1rc2.post0+3.g4ce0adb07e
pyproj
2.6.1.post1
pytest
7.1.3
pytest-json-report
1.5.0
requests
2.28.1
scipy
1.1.0
setuptools
65.4.1
shapefile
---
sqlalchemy
1.4.41

Modules (60)

Module Errors / Failures Tracebacks
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl - -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core 1 1
obspy.core.event - -
obspy.core.inventory - -
obspy.core.util - -
obspy.db Not tested -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 1 1

Tracebacks (1)

1 core 

Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 1350, in do_open
encode_chunked=req.has_header('Transfer-encoding'))
File "/usr/share/miniconda3/envs/test/lib/python3.7/http/client.py", line 1281, in request
self._send_request(method, url, body, headers, encode_chunked)
File "/usr/share/miniconda3/envs/test/lib/python3.7/http/client.py", line 1327, in _send_request
self.endheaders(body, encode_chunked=encode_chunked)
File "/usr/share/miniconda3/envs/test/lib/python3.7/http/client.py", line 1276, in endheaders
self._send_output(message_body, encode_chunked=encode_chunked)
File "/usr/share/miniconda3/envs/test/lib/python3.7/http/client.py", line 1036, in _send_output
self.send(msg)
File "/usr/share/miniconda3/envs/test/lib/python3.7/http/client.py", line 976, in send
self.connect()
File "/usr/share/miniconda3/envs/test/lib/python3.7/http/client.py", line 1451, in connect
server_hostname=server_hostname)
File "/usr/share/miniconda3/envs/test/lib/python3.7/ssl.py", line 423, in wrap_socket
session=session
File "/usr/share/miniconda3/envs/test/lib/python3.7/ssl.py", line 870, in _create
self.do_handshake()
File "/usr/share/miniconda3/envs/test/lib/python3.7/ssl.py", line 1139, in do_handshake
self._sslobj.do_handshake()
ConnectionResetError: [Errno 104] Connection reset by peer
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/obspy/core/tests/test_inventory.py", line 699, in test_location_plot_global
inv.plot(method='cartopy', outfile=image_path)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/obspy/core/inventory/inventory.py", line 1024, in plot
fig.savefig(outfile)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/figure.py", line 2203, in savefig
self.canvas.print_figure(fname, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 2126, in print_figure
**kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/backends/backend_agg.py", line 514, in print_png
FigureCanvasAgg.draw(self)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/backends/backend_agg.py", line 393, in draw
self.figure.draw(self.renderer)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/artist.py", line 38, in draw_wrapper
return draw(artist, renderer, *args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/figure.py", line 1736, in draw
renderer, self, artists, self.suppressComposite)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/image.py", line 137, in _draw_list_compositing_images
a.draw(renderer)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/artist.py", line 38, in draw_wrapper
return draw(artist, renderer, *args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/mpl/geoaxes.py", line 388, in draw
inframe=inframe)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/artist.py", line 38, in draw_wrapper
return draw(artist, renderer, *args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/axes/_base.py", line 2630, in draw
mimage._draw_list_compositing_images(renderer, self, artists)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/image.py", line 137, in _draw_list_compositing_images
a.draw(renderer)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/matplotlib/artist.py", line 38, in draw_wrapper
return draw(artist, renderer, *args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/mpl/feature_artist.py", line 164, in draw
geoms = self._feature.intersecting_geometries(extent)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/feature/__init__.py", line 303, in intersecting_geometries
return super(NaturalEarthFeature, self).intersecting_geometries(extent)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/feature/__init__.py", line 120, in intersecting_geometries
return (geom for geom in self.geometries() if
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/feature/__init__.py", line 287, in geometries
name=self.name)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/io/shapereader.py", line 359, in natural_earth
return ne_downloader.path(format_dict)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/io/__init__.py", line 222, in path
result_path = self.acquire_resource(target_path, format_dict)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/io/shapereader.py", line 414, in acquire_resource
shapefile_online = self._urlopen(url)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/io/__init__.py", line 261, in _urlopen
return urlopen(url)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 222, in urlopen
return opener.open(url, data, timeout)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 531, in open
response = meth(req, response)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 641, in http_response
'http', request, response, code, msg, hdrs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 563, in error
result = self._call_chain(*args)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 503, in _call_chain
result = func(*args)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 755, in http_error_302
return self.parent.open(new, timeout=req.timeout)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 525, in open
response = self._open(req, data)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 543, in _open
'_open', req)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 503, in _call_chain
result = func(*args)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 1393, in https_open
context=self._context, check_hostname=self._check_hostname)
File "/usr/share/miniconda3/envs/test/lib/python3.7/urllib/request.py", line 1352, in do_open
raise URLError(err)
urllib.error.URLError: <urlopen error [Errno 104] Connection reset by peer>

Skipped tests (19)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_bug150 Skipped: Geographiclib installed, not using calc_vincenty_inverse
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
signal signal/tests/test_quality_control.py::QualityControlTestCase::test_schema_validation Skipped: Test requires the jsonschema module

Slowest tests (20)

Runtime Test
8.576s io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
6.346s core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps
5.433s taup/__init__.py::obspy.taup
4.462s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
3.817s core/stream.py::obspy.core.stream.read
2.875s signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
2.550s signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale
2.531s taup/tau.py::obspy.taup.tau.plot_travel_times
2.428s taup/tests/test_tau.py::TestTauPyModel::test_regional_models
2.359s signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
2.353s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_vertical_section
2.237s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_colored_section
2.225s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_horizontal_section
2.205s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_negative_section
2.203s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_positive_section
2.191s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_azim_section
2.187s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_ref_time_section
2.183s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_default_section
2.182s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_horizontal_section
2.176s taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91

Warnings (11)

Stage Filename Category Message
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/scipy/signal/signaltools.py:2223 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/mpl/geoaxes.py:782 MatplotlibDeprecationWarning Passing the minor parameter of set_xticks() positionally is deprecated since Matplotlib 3.2; the parameter will become keyword-only two minor releases later.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/mpl/geoaxes.py:1063 DeprecationWarning Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3,and in 3.9 it will stop working
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/scipy/signal/signaltools.py:491 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/matrixlib/defmatrix.py:68 PendingDeprecationWarning the matrix subclass is not the recommended way to represent matrices or deal with linear algebra (see https://docs.scipy.org/doc/numpy/user/numpy-for-matlab-users.html). Please adjust your code to use regular ndarray.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/scipy/fftpack/basic.py:160 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/scipy/signal/signaltools.py:2230 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/cartopy/mpl/geoaxes.py:829 MatplotlibDeprecationWarning Passing the minor parameter of set_yticks() positionally is deprecated since Matplotlib 3.2; the parameter will become keyword-only two minor releases later.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/scipy/signal/signaltools.py:2225 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/scipy/signal/signaltools.py:1344 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest /usr/share/miniconda3/envs/test/lib/python3.7/site-packages/scipy/signal/signaltools.py:1593 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.