#124546 Report by node gh-actions covering 2013 tests from 60 modules resulted into 11 errors

Report

ObsPy version: 1.3.0.post0+78.g5c960cc932

GitHub Pull Request: https://github.com/obspy/obspy/pull/3073

Report file: JSON document

Total runtime: 216.6 sec
Report date/time: May 24, 2022, 5:02 a.m.

System / Python

Architecture: 64bit
Machine: x86_64
Node: gh-actions
Processor: x86_64
Python Compiler: GCC 10.3.0
Python Implementation: CPython
Python Version: 3.10.4
Release: 5.13.0-1023-azure
System: Linux
Version: #27~20.04.1-Ubuntu SMP Mon Apr 25 22:39:07 UTC 2022

Dependencies

cartopy: ---
decorator: 5.1.1
flake8: ---
geographiclib: ---
lxml: 4.8.0
matplotlib: 3.5.2
numpy: 1.22.4
obspy: 1.3.0.post0+78.g5c960cc932
pyproj: ---
pytest: 7.1.2
pytest-json-report: 1.5.0
requests: 2.27.1
scipy: 1.8.1
setuptools: 62.3.2
shapefile: ---
sqlalchemy: 1.4.36

Modules (60)

Module	Errors / Failures	Total	Executed	Skipped	Runtime	Tracebacks
obspy.clients.earthworm	Not tested	-	-	-	-	-
obspy.clients.fdsn	-	13	13	-	0.05s	-
obspy.clients.filesystem	-	29	29	-	3.69s	-
obspy.clients.iris	Not tested	-	-	-	-	-
obspy.clients.neic	Not tested	-	-	-	-	-
obspy.clients.nrl	Not tested	-	-	-	-	-
obspy.clients.seedlink	Not tested	-	-	-	-	-
obspy.clients.seishub	Not tested	-	-	-	-	-
obspy.clients.syngine	Not tested	-	-	-	-	-
obspy.core	-	595	586	9	33.10s	-
obspy.core.event	-	18	18	-	0.28s	-
obspy.core.inventory	-	23	23	-	1.92s	-
obspy.core.util	-	23	20	3	0.22s	-
obspy.db	Not tested	-	-	-	-	-
obspy.geodetics	-	21	19	2	0.22s	-
obspy.imaging	3	88	87	1	25.42s	1 2 3
obspy.io.ah	-	5	5	-	0.17s	-
obspy.io.arclink	-	5	5	-	2.68s	-
obspy.io.ascii	-	28	26	2	0.22s	-
obspy.io.cmtsolution	-	10	10	-	0.11s	-
obspy.io.cnv	-	1	1	-	0.02s	-
obspy.io.css	-	10	10	-	0.65s	-
obspy.io.dmx	-	5	5	-	0.04s	-
obspy.io.focmec	-	8	8	-	0.27s	-
obspy.io.gcf	-	9	9	-	0.05s	-
obspy.io.gse2	-	55	55	-	0.70s	-
obspy.io.hypodd	-	9	9	-	0.25s	-
obspy.io.iaspei	-	7	7	-	1.10s	-
obspy.io.json	-	4	4	-	0.04s	-
obspy.io.kinemetrics	-	8	8	-	0.88s	-
obspy.io.kml	-	3	3	-	0.18s	-
obspy.io.mseed	-	127	127	-	2.75s	-
obspy.io.ndk	-	20	20	-	0.63s	-
obspy.io.nied	-	11	11	-	0.11s	-
obspy.io.nlloc	-	13	12	1	0.28s	-
obspy.io.nordic	-	60	58	2	2.64s	-
obspy.io.pdas	-	3	3	-	0.02s	-
obspy.io.pde	-	13	12	1	0.46s	-
obspy.io.quakeml	-	38	37	1	0.70s	-
obspy.io.reftek	-	21	21	-	0.28s	-
obspy.io.rg16	-	38	38	-	0.24s	-
obspy.io.sac	-	96	96	-	0.69s	-
obspy.io.scardec	-	5	5	-	0.11s	-
obspy.io.seg2	-	2	2	-	0.04s	-
obspy.io.segy	-	56	56	-	0.64s	-
obspy.io.seisan	-	8	7	1	0.13s	-
obspy.io.seiscomp	-	49	49	-	2.02s	-
obspy.io.sh	-	26	24	2	0.82s	-
obspy.io.shapefile	-	7	1	6	0.11s	-
obspy.io.stationtxt	-	11	11	-	0.13s	-
obspy.io.stationxml	-	23	23	-	0.62s	-
obspy.io.wav	-	8	7	1	0.05s	-
obspy.io.win	-	2	2	-	0.13s	-
obspy.io.xseed	-	82	82	-	14.81s	-
obspy.io.y	-	5	4	1	0.03s	-
obspy.io.zmap	-	14	14	-	0.32s	-
obspy.realtime	-	22	22	-	0.63s	-
obspy.scripts	-	2	2	-	0.02s	-
obspy.signal	8	203	201	2	33.74s	4 5 6 7 8 9 10 11
obspy.taup	-	71	65	6	57.24s	-
Summary	11	2013	1972	41	216.55s	11

Tracebacks (11)

1 imaging

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/imaging/tests/test_ppsd.py", line 29, in test_ppsd_plot
ppsd.plot(
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1900, in plot
self.__check_histogram()
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 820, in __check_histogram
raise Exception(msg)
Exception: No data accumulated

2 imaging

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/imaging/tests/test_ppsd.py", line 44, in test_ppsd_plot_frequency
ppsd.plot(
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1900, in plot
self.__check_histogram()
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 820, in __check_histogram
raise Exception(msg)
Exception: No data accumulated

3 imaging

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/imaging/tests/test_ppsd.py", line 60, in test_ppsd_plot_cumulative
ppsd.plot(
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1900, in plot
self.__check_histogram()
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 820, in __check_histogram
raise Exception(msg)
Exception: No data accumulated

4 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 191, in test_ppsd
assert len(ppsd.times_processed) == 4
AssertionError: assert 0 == 4
+ where 0 = len([])
+ where [] = <obspy.signal.spectral_estimation.PPSD object at 0x7fead9358cd0>.times_processed

5 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 288, in test_ppsd_w_iris
(per, perval) = ppsd.get_percentile(percentile=50)
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1324, in get_percentile
hist_cum = self.current_histogram_cumulative
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 617, in current_histogram_cumulative
self.__check_histogram()
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 820, in __check_histogram
raise Exception(msg)
Exception: No data accumulated

6 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 503, in test_earthquake_models
fig = ppsd.plot(
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1900, in plot
self.__check_histogram()
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 820, in __check_histogram
raise Exception(msg)
Exception: No data accumulated

7 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 532, in test_ppsd_infrasound
fig = ppsd.plot(xaxis_frequency=True, period_lim=(0.01, 10),
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1900, in plot
self.__check_histogram()
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 820, in __check_histogram
raise Exception(msg)
Exception: No data accumulated

8 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 676, in test_issue1216
assert ppsd.current_histogram is not None
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 612, in current_histogram
self.__check_histogram()
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 820, in __check_histogram
raise Exception(msg)
Exception: No data accumulated

9 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 718, in test_wrong_trace_id_message
assert len(w) == 4
AssertionError: assert 1 == 4
+ where 1 = len([<warnings.WarningMessage object at 0x7fead9602350>])

10 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 770, in test_exclude_last_sample
assert 3 == len(ppsd._times_processed)
AssertionError: assert 3 == 0
+ where 0 = len([])
+ where [] = <obspy.signal.spectral_estimation.PPSD object at 0x7feac7845f60>._times_processed

11 signal

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 903, in test_short_trace_warning
with CatchAndAssertWarnings(expected=[(UserWarning, msg)]):
File "/home/runner/work/obspy/obspy/obspy/core/util/base.py", line 707, in __exit__
self._assert_warnings()
File "/home/runner/work/obspy/obspy/obspy/core/util/base.py", line 742, in _assert_warnings
raise AssertionError(msg % (category.__name__, regex))
AssertionError: Expected warning not raised: (UserWarning, Trace is shorter than this PPSD's 'ppsd_length' (3600.0 seconds). Skipping trace: BW.KW1..EHZ | 2011-03-31T00:00:00.180000Z - 2011-03-31T00:00:00.210000Z | 100.0 Hz, 4 samples)

Skipped tests (41)

Submodule	Test	Skip message
core	core/stream.py::obspy.core.stream._is_pickle	Skipped: all tests skipped by +SKIP option
core	core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps	Skipped: cartopy not installed
core	core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_global	Skipped: cartopy not installed
core	core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_ortho	Skipped: cartopy not installed
core	core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_local	Skipped: cartopy not installed
core	core/tests/test_inventory.py::TestInventoryCartopy::test_combined_station_event_plot	Skipped: cartopy not installed
core	core/tests/test_network.py::TestNetworkCartopy::test_location_plot_global	Skipped: cartopy not installed
core	core/tests/test_network.py::TestNetworkCartopy::test_location_plot_ortho	Skipped: cartopy not installed
core	core/tests/test_network.py::TestNetworkCartopy::test_location_plot_local	Skipped: cartopy not installed
core.util	core/util/misc.py::obspy.core.util.misc.CatchOutput	Skipped: all tests skipped by +SKIP option
core.util	core/util/misc.py::obspy.core.util.misc.SuppressOutput	Skipped: all tests skipped by +SKIP option
core.util	core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory	Skipped: all tests skipped by +SKIP option
geodetics	geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_with_geographiclib	Skipped: Module geographiclib is not installed
geodetics	geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_issue_375	Skipped: Module geographiclib is not installed
imaging	imaging/tests/test_mopad_script.py::TestMopad::test_script_plot	Skipped: Currently broken until further review.
io.ascii	io/ascii/core.py::obspy.io.ascii.core._is_slist	Skipped: all tests skipped by +SKIP option
io.ascii	io/ascii/core.py::obspy.io.ascii.core._is_tspair	Skipped: all tests skipped by +SKIP option
io.nlloc	io/nlloc/tests/test_util.py::NLLOCTestCase::test_read_nlloc_scatter_coordinate_conversion	Skipped: pyproj not installed
io.nordic	io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor	Skipped: all tests skipped by +SKIP option
io.nordic	io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag	Skipped: all tests skipped by +SKIP option
io.pde	io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr	Skipped: all tests skipped by +SKIP option
io.quakeml	io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml	Skipped: all tests skipped by +SKIP option
io.seisan	io/seisan/core.py::obspy.io.seisan.core._is_seisan	Skipped: all tests skipped by +SKIP option
io.sh	io/sh/core.py::obspy.io.sh.core._is_asc	Skipped: all tests skipped by +SKIP option
io.sh	io/sh/core.py::obspy.io.sh.core._is_q	Skipped: all tests skipped by +SKIP option
io.shapefile	io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile	Skipped: pyshp not installed
io.shapefile	io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_via_plugin	Skipped: pyshp not installed
io.shapefile	io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_with_extra_field	Skipped: pyshp not installed
io.shapefile	io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile	Skipped: pyshp not installed
io.shapefile	io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_via_plugin	Skipped: pyshp not installed
io.shapefile	io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_with_extra_field	Skipped: pyshp not installed
io.wav	io/wav/core.py::obspy.io.wav.core._is_wav	Skipped: all tests skipped by +SKIP option
io.y	io/y/core.py::obspy.io.y.core._is_y	Skipped: all tests skipped by +SKIP option
signal	signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata	Skipped: all tests skipped by +SKIP option
signal	signal/tests/test_quality_control.py::QualityControlTestCase::test_schema_validation	Skipped: Test requires the jsonschema module
taup	taup/tests/test_ray_paths.py::TestRayPathCalculations::test_compute_ray_paths	Skipped: test needs geographiclib >= 1.34
taup	taup/tests/test_tau.py::TestTauPyModel::test_p_iasp91_geo_manual	Skipped: Module geographiclib is not installed
taup	taup/tests/test_tau.py::TestTauPyModel::test_pierce_p_iasp91_geo	Skipped: test needs geographiclib >= 1.34
taup	taup/tests/test_tau.py::TestTauPyModel::test_single_path_geo_iasp91	Skipped: test needs geographiclib >= 1.34
taup	taup/tests/test_taup_geo.py::TestTaupGeo::test_path_geo	Skipped: Module geographiclib is not installed or too old.
taup	taup/tests/test_taup_geo.py::TestTaupGeo::test_path_resampling	Skipped: Module geographiclib is not installed or too old.

Slowest tests (20)

Runtime	Test
10.998s	io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
8.070s	taup/__init__.py::obspy.taup
6.655s	taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
4.034s	core/stream.py::obspy.core.stream.read
3.604s	taup/tau.py::obspy.taup.tau.plot_travel_times
3.222s	taup/tests/test_tau.py::TestTauPyModel::test_regional_models
3.212s	taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91
2.745s	signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
2.616s	io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
2.610s	taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_many_identically_named_phases
2.602s	core/tests/test_stream.py::TestStream::test_read_url_via_network
2.538s	signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale
2.473s	signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_restricted_stacks
2.345s	signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
2.186s	taup/tests/test_velocity_model.py::TestTauPyVelocityModel::test_read_velocity_model
2.109s	core/tests/test_trace.py::TestTrace::test_remove_response_plot
1.752s	signal/tests/test_rotate.py::RotateTestCase::test_rotate2zne_against_lqt_different_combinations
1.650s	signal/tests/test_tf_misfit.py::TestTfPlot::test_plot_tf_gofs
1.635s	signal/tf_misfit.py::obspy.signal.tf_misfit.plot_tfr
1.593s	taup/tests/test_tau.py::TestTauPyModel::test_surface_wave_ttimes

Warnings (5)

Stage	Filename	Category	Message
runtest	/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py:885	UserWarning	Trace is shorter than this PPSD's 'ppsd_length' (3600.0 seconds). Skipping trace: IU.ANMO.00.LHZ \| 2010-01-01T00:00:00.069500Z - 2010-01-01T23:59:59.069500Z \| 1.0 Hz, 86400 samples
runtest	/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py:885	UserWarning	Trace is shorter than this PPSD's 'ppsd_length' (3600.0 seconds). Skipping trace: GR.FUR..BHZ \| 2017-01-01T00:00:00.000000Z - 2017-01-01T01:59:59.000000Z \| 1.0 Hz, 7200 samples
runtest	/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py:885	UserWarning	Trace is shorter than this PPSD's 'ppsd_length' (300 seconds). Skipping trace: IM.I59H1..BDF \| 2020-10-31T00:00:00.000000Z - 2020-10-31T00:07:40.000000Z \| 20.0 Hz, 9201 samples
collect	/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py:885	UserWarning	Trace is shorter than this PPSD's 'ppsd_length' (3600.0 seconds). Skipping trace: BW.KW1..EHZ \| 2011-03-31T00:00:00.180000Z - 2011-03-31T02:36:00.180000Z \| 100.0 Hz, 936001 samples
runtest	/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py:885	UserWarning	Trace is shorter than this PPSD's 'ppsd_length' (3600.0 seconds). Skipping trace: BW.KW1..EHZ \| 2011-03-31T00:00:00.180000Z - 2011-03-31T02:36:00.180000Z \| 100.0 Hz, 936001 samples