#118840 Report by node kiste covering 2006 tests from 62 modules resulted into no errors

Report

ObsPy version
1.2.2.post0+546.gbd12080f90.o…
GitHub Pull Request
-
Report file
JSON document
Total runtime
289.1 sec
Report date/time
Feb. 7, 2022, 4:55 a.m.

System / Python

Architecture
64bit
Machine
x86_64
Node
kiste
Processor
x86_64
Python Compiler
GCC 9.3.0
Python Implementation
CPython
Python Version
3.8.6
Release
4.15.0-167-generic
System
Linux
Version
#175-Ubuntu SMP Wed Jan 5 01:56:07 UTC 2022

Dependencies

cartopy
0.19.0.post1
decorator
4.4.2
flake8
3.8.4
geographiclib
1.50
lxml
4.6.2
matplotlib
3.4.2
numpy
1.19.5
obspy
1.2.2.post0+546.gbd12080f90.obspy.master
pyproj
3.1.0
pytest
6.2.4
pytest-json-report
1.4.1
requests
2.25.1
scipy
1.5.3
setuptools
49.6.0.post20210108
shapefile
---
sqlalchemy
1.3.22

Modules (62)

Module Errors / Failures Tracebacks
obspy.clients Not tested -
obspy.clients.arclink Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core - -
obspy.core.event - -
obspy.core.inventory - -
obspy.core.util - -
obspy.db Not tested -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary - -

Skipped tests (19)

Submodule Test Skip message
core obspy/core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core.util obspy/core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util obspy/core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util obspy/core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics obspy/geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_bug150 Skipped: Geographiclib installed, not using calc_vincenty_inverse
imaging obspy/imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii obspy/io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii obspy/io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.nordic obspy/io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic obspy/io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde obspy/io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml obspy/io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan obspy/io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh obspy/io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh obspy/io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.wav obspy/io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y obspy/io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal obspy/signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
signal obspy/signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_spectrogram_plot Skipped: matplotlib >= 3 shifts labels

Slowest tests (20)

Runtime Test
21.840s obspy/core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps
7.698s obspy/io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
6.315s obspy/taup/__init__.py::obspy.taup
6.285s obspy/core/tests/test_trace.py::TestTrace::test_remove_response_plot
5.589s obspy/signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
4.925s obspy/taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
3.677s obspy/imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_tiny
3.564s obspy/imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_huge
3.361s obspy/signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_restricted_stacks
3.353s obspy/signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_using_dict
3.336s obspy/signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_using_traces
3.299s obspy/imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces
3.039s obspy/io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
2.875s obspy/core/tests/test_inventory.py::TestInventory::test_response_plot
2.827s obspy/core/tests/test_channel.py::TestChannel::test_response_plot
2.747s obspy/taup/tests/test_taup_plotting.py::TestTauPyPlotting::test_spherical_many_phases
2.697s obspy/imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_horizontal_section
2.692s obspy/taup/tau.py::obspy.taup.tau.plot_travel_times
2.480s obspy/taup/tests/test_tau.py::TestTauPyModel::test_regional_models
2.457s obspy/signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale

Warnings (28)

Stage Filename Category Message
runtest <doctest obspy.core.event.resourceid.ResourceIdentifier[37]>:1 ObsPyDeprecationWarning Converts the current ID to a valid QuakeML URI. This method is deprecated, use :meth:`get_quakeml_id` instead. Only an invalid QuakeML ResourceIdentifier string it will be converted to a valid one. Otherwise nothing will happen but after calling this method the user can be sure that the ID is a valid QuakeML URI. The resulting ID will be of the form smi:authority_id/prefix/resource_id :type authority_id: str, optional :param authority_id: The base url of the resulting string. Defaults to ``"local"``.
runtest /home/eule/dev/obspy/obspy/signal/spectral_estimation.py:1544 UserWarning 4/4 segments omitted in file '/tmp/obspy-67ysvx_l.npz' (time ranges already covered).
runtest <doctest obspy.signal._sosfilt._sosfilt[13]>:1 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
runtest /home/eule/dev/obspy/obspy/imaging/beachball.py:274 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
runtest /home/eule/dev/obspy/obspy/taup/tau.py:513 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
runtest /home/eule/dev/obspy/obspy/core/event/resourceid.py:348 UserWarning The object with identity of: 139855547114208 and id of obspy.org/tests/test_resource_doc_example no longer exists, trying to find an object with the same id
runtest /home/eule/dev/obspy/obspy/signal/spectral_estimation.py:2045 UserWarning Attempting to set identical left == right == 9.223855751103727 results in singular transformations; automatically expanding.
runtest /home/eule/dev/obspy/obspy/core/event/resourceid.py:348 UserWarning The object with identity of: 139855547116416 and id of obspy.org/tests/test_resource_doc_example no longer exists, trying to find an object with the same id
runtest /home/eule/dev/obspy/obspy/signal/cross_correlation.py:985 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
runtest /home/eule/anaconda/envs/workhorse/lib/python3.8/site-packages/numpy/matrixlib/defmatrix.py:69 PendingDeprecationWarning the matrix subclass is not the recommended way to represent matrices or deal with linear algebra (see https://docs.scipy.org/doc/numpy/user/numpy-for-matlab-users.html). Please adjust your code to use regular ndarray.
runtest /home/eule/dev/obspy/obspy/taup/tau.py:1084 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
runtest /home/eule/dev/obspy/obspy/io/nordic/utils.py:184 UserWarning Lines of type I have not been implemented yet, please submit a development request
runtest /home/eule/dev/obspy/obspy/taup/tau.py:244 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
runtest /home/eule/dev/obspy/obspy/io/seiscomp/inventory.py:514 UserWarning Something went hopelessly wrong, found sampling-rate of 0!
runtest /home/eule/dev/obspy/obspy/core/event/resourceid.py:622 UserWarning overwritting the id attribute of a ResourceIdentifierobject is very dangerous and will raise an exception in a future version of obspy
runtest /home/eule/dev/obspy/obspy/signal/spectral_estimation.py:2045 UserWarning Attempted to set non-positive right xlim on a log-scaled axis. Invalid limit will be ignored.
runtest /home/eule/dev/obspy/obspy/io/quakeml/core.py:1899 UserWarning Could not validate QuakeML - try using a newer lxml version
runtest /home/eule/dev/obspy/obspy/signal/spectral_estimation.py:2045 UserWarning Attempting to set identical left == right == 10.4999995 results in singular transformations; automatically expanding.
runtest /home/eule/dev/obspy/obspy/signal/spectral_estimation.py:2045 UserWarning Attempting to set identical left == right == 52.49999950000001 results in singular transformations; automatically expanding.
runtest /home/eule/dev/obspy/obspy/core/utcdatetime.py:1084 ObsPyDeprecationWarning Comparing UTCDateTime objects of different precision is not defined will raise an Exception in a future version of obspy
runtest /home/eule/dev/obspy/obspy/imaging/scripts/scan.py:437 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
runtest /home/eule/dev/obspy/obspy/imaging/beachball.py:245 RuntimeWarning More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`).
runtest /home/eule/dev/obspy/obspy/core/event/resourceid.py:348 UserWarning The object with identity of: 139855547114544 and id of smi:local/2a7c6065-184e-464e-b749-360fd1ca7349 no longer exists, trying to find an object with the same id
collect /home/eule/dev/obspy/obspy/clients/arclink/__init__.py:34 ObsPyDeprecationWarning ArcLink protocol has been officially deprecated and some main servers have been shut down already. Please consider using other methods like FDSN web services to fetch data. ArcLink functionality is now untested in ObsPy.
runtest /home/eule/dev/obspy/obspy/imaging/source.py:196 UserWarning Tight layout not applied. The left and right margins cannot be made large enough to accommodate all axes decorations.
runtest /home/eule/dev/obspy/obspy/io/seiscomp/inventory.py:496 UserWarning Clock drift division by sample rate of 0: using sec/sample
runtest /home/eule/dev/obspy/obspy/taup/tau.py:340 RuntimeWarning More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`).
runtest /home/eule/dev/obspy/obspy/taup/tau.py:975 UserWarning Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.